kellogg_ddg_jd3.cc File Reference

#include <core/pose/Pose.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/pack/task/operation/TaskOperation.hh>
#include <core/pack/task/operation/TaskOperations.hh>
#include <core/pack/task/TaskFactory.hh>
#include <basic/options/option.hh>
#include <core/kinematics/MoveMap.hh>
#include <protocols/minimization_packing/MinPackMover.hh>
#include <protocols/minimization_packing/PackRotamersMover.hh>
#include <protocols/minimization_packing/MinPackMoverCreator.hh>
#include <protocols/minimization_packing/PackRotamersMoverCreator.hh>
#include <protocols/minimization_packing/symmetry/SymPackRotamersMover.hh>
#include <protocols/minimization_packing/MinMover.hh>
#include <protocols/minimization_packing/MinMoverCreator.hh>
#include <protocols/minimization_packing/symmetry/SymMinMover.hh>
#include <protocols/minimization_packing/TaskAwareMinMover.hh>
#include <protocols/symmetry/SetupForSymmetryMover.hh>
#include <protocols/moves/MoverContainer.hh>
#include <protocols/moves/util.hh>
#include <protocols/jd2/parser/ScoreFunctionLoader.hh>
#include <protocols/jd2/parser/TaskOperationLoader.hh>
#include <protocols/jd3/InnerLarvalJob.hh>
#include <protocols/jd3/Job.hh>
#include <protocols/jd3/JobDistributor.hh>
#include <protocols/jd3/JobDistributorFactory.hh>
#include <protocols/jd3/LarvalJob.hh>
#include <protocols/jd3/MoverAndPoseJob.hh>
#include <protocols/jd3/StandardJobQueen.hh>
#include <protocols/jd3/pose_outputters/PoseOutputter.hh>
#include <devel/init.hh>
#include <basic/datacache/ConstDataMap.hh>
#include <basic/datacache/DataMap.hh>
#include <utility/vector0.hh>
#include <utility/vector1.hh>
#include <utility/excn/Exceptions.hh>
#include <utility/tag/Tag.hh>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <basic/options/keys/run.OptionKeys.gen.hh>
#include <basic/options/keys/packing.OptionKeys.gen.hh>
#include <basic/options/keys/symmetry.OptionKeys.gen.hh>

Classes
class	FixbbJobQueen

Namespaces
	basic
	Tags used to tag messeges sent by MPI functions used to decide whether a slave is requesting a new job id or flagging as job as being a bad input.
	basic::options
	basic::options::OptionKeys

Functions
int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR ("apps.pilot.andrew.fixbb_jd3")
basic::options::BooleanOptionKey const	basic::options::OptionKeys::minimize_sidechains ("minimize_sidechains")
basic::options::BooleanOptionKey const	basic::options::OptionKeys::min_pack ("min_pack")
basic::options::BooleanOptionKey const	basic::options::OptionKeys::off_rotamer_pack ("off_rotamer_pack")

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, test.T009_Exceptions::e, basic::init(), demo.D060_Folding::jd, basic::options::OptionKeys::min_pack, basic::options::OptionKeys::minimize_sidechains, basic::options::OptionKeys::off_rotamer_pack, and option.

Variable Documentation

TR

basic::Tracer TR("apps.pilot.andrew.fixbb_jd3") ( "apps.pilot.andrew.fixbb_jd3"  )

static

Referenced by FixbbJobQueen::complete_larval_job_maturation().