swap_elements.cc File Reference

#include <core/pose/Pose.hh>
#include <protocols/moves/Mover.hh>
#include <numeric/xyz.functions.hh>
#include <basic/database/open.hh>
#include <core/pose/symmetry/util.hh>
#include <core/scoring/rms_util.hh>
#include <utility/exit.hh>
#include <protocols/jd2/JobDistributor.hh>
#include <protocols/jd2/JobOutputter.hh>
#include <protocols/jd2/Job.hh>
#include <ObjexxFCL/string.functions.hh>
#include <basic/options/option_macros.hh>
#include <basic/Tracer.hh>
#include <devel/init.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/OptionKeys.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <protocols/symmetry/DetectSymmetryMover.hh>
#include <protocols/forge/build/BuildManager.hh>
#include <protocols/forge/build/SegmentRebuild.hh>
#include <protocols/forge/components/VarLengthBuild.hh>
#include <protocols/forge/build/Interval.hh>
#include <core/chemical/ResidueType.hh>
#include <protocols/simple_moves/SuperimposeMover.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/ResidueFactory.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/fragment/FragData.hh>
#include <core/fragment/IndependentBBTorsionSRFD.hh>
#include <core/fragment/FrameList.hh>
#include <core/fragment/picking_old/vall/util.hh>
#include <core/fragment/picking_old/FragmentLibraryManager.hh>
#include <core/fragment/Frame.hh>
#include <core/chemical/AA.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/pose/util.hh>
#include <numeric/xyzVector.hh>
#include <numeric/xyzMatrix.hh>
#include <protocols/rigid/RB_geometry.hh>
#include <fstream>
#include <core/io/pdb/pdb_writer.hh>
#include <ObjexxFCL/format.hh>
#include <core/conformation/symmetry/SymmData.hh>
#include <protocols/minimization_packing/symmetry/SymMinMover.hh>
#include <basic/options/keys/symmetry.OptionKeys.gen.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/symmetry/SymmetricScoreFunction.hh>
#include <utility/excn/Exceptions.hh>

Classes
class	ThisApplication
class	SwapElementsMover1
class	SwapElementsMover2

Functions
int	main (int argc, char **argv)

Variables
static basic::Tracer	TR ("main")

Detailed Description

Author

Function Documentation

main()

int main	(	int	argc,
		char **	argv
	)

References argv, test.T009_Exceptions::e, basic::init(), basic::options::OptionKeys::docking::ligand::protocol, and ThisApplication::register_options().

Variable Documentation

TR

basic::Tracer TR("main") ( "main"  )

static