peptide_minimizer.cc File Reference

does stuff More...

#include <devel/init.hh>
#include <core/pose/Pose.hh>
#include <core/conformation/Conformation.hh>
#include <core/io/pdb/pdb_writer.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/methods/EnergyMethodOptions.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/pose/PDBInfo.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/EnergyMap.hh>
#include <core/scoring/hbonds/hbonds.hh>
#include <core/scoring/hbonds/HBondSet.hh>
#include <core/scoring/hbonds/HBondOptions.hh>
#include <protocols/minimization_packing/MinMover.hh>
#include <protocols/moves/Mover.fwd.hh>
#include <protocols/simple_moves/BackboneMover.hh>
#include <protocols/moves/MoverContainer.hh>
#include <protocols/moves/TrialMover.hh>
#include <protocols/moves/MonteCarlo.hh>
#include <protocols/docking/DockingProtocol.hh>
#include <protocols/jd2/JobDistributor.hh>
#include <protocols/jd2/Job.hh>
#include <protocols/jd2/JobOutputter.hh>
#include <basic/Tracer.hh>
#include <utility/file/FileName.hh>
#include <basic/options/util.hh>
#include <basic/options/keys/run.OptionKeys.gen.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <sstream>
#include <iostream>
#include <string>
#include <stdlib.h>

Classes
class	PepMinMover

Functions
int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR ("PepMin")
static basic::Tracer	TRdebug ("PepMin.debug")
RealOptionKey const	bbhbond_weight_mod ("bbhbond_weight_mod")
IntegerOptionKey const	ncycles ("ncycles")

Detailed Description

does stuff

Author

Ben Stranges

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, bbhbond_weight_mod, utility::io::oc::cout, test.T009_Exceptions::e, basic::init(), ncycles, and option.

Variable Documentation

bbhbond_weight_mod

RealOptionKey const bbhbond_weight_mod("bbhbond_weight_mod")

(

"bbhbond_weight_mod"

)

Referenced by main(), and PepMinMover::PepMinMover().

ncycles

IntegerOptionKey const ncycles("ncycles")

(

"ncycles"

)

Referenced by main(), and PepMinMover::PepMinMover().

TR

basic::Tracer TR("PepMin") ( "PepMin"  )

static

Referenced by PepMinMover::apply(), and PepMinMover::PepMinMover().

TRdebug

basic::Tracer TRdebug("PepMin.debug") ( "PepMin.debug"  )

static

Referenced by PepMinMover::apply().