#include <devel/init.hh>
#include <core/sequence/Sequence.hh>
#include <basic/Tracer.hh>
#include <core/options/option.hh>
#include <core/options/option_macros.hh>
#include <core/options/keys/OptionKeys.hh>
#include <core/options/keys/frags.OptionKeys.gen.hh>
#include <core/options/keys/in.OptionKeys.gen.hh>
#include <core/options/keys/constraints.OptionKeys.gen.hh>
#include <utility/vector1.hh>
#include <core/fragment/picking/FragmentPicker.hh>
#include <core/fragment/picking/VallProvider.hh>
#include <core/fragment/picking/VallChunk.hh>
#include <core/fragment/picking/VallResidue.hh>
#include <core/fragment/picking/FragmentCandidate.hh>
#include <core/fragment/picking/FragmentSelectingRule.hh>
#include <core/fragment/picking/VallChunkFilter.hh>
#include <core/fragment/picking/BoundedCollector.hh>
#include <core/fragment/picking/BestTotalScoreSelector.hh>
#include <core/fragment/picking/scores/FragmentScoringMethod.hh>
#include <utility>
#include <utility/excn/Exceptions.hh>
#include <utility/io/mpistream.hh>

Functions
void	register_options ()

void	setup_nnmake_style_quota ()

int	main (int argc, char *argv[])

Variables
static basic::Tracer	trace ("fragmentpicker_integration_demo")

Function Documentation

◆ main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, in::file::checkpoint(), basic::options::OptionKeys::nonlocal::chunks, frags::scoring::config(), test.T009_Exceptions::e, basic::Tracer::Info, basic::init(), frags::n_candidates(), frags::n_frags(), option, in::file::psipred_ss2(), register_options(), basic::options::OptionKeys::frags::scoring::scoring, basic::options::OptionKeys::relax::sequence, trace, and in::file::vall().

◆ register_options()

void register_options ( )

References in::file::checkpoint(), frags::scoring::config(), constraints::cst_file(), in::path::database(), frags::denied_pdb(), in::file::native(), OPT, and in::file::psipred_ss2().

Referenced by main().

◆ setup_nnmake_style_quota()

void setup_nnmake_style_quota ( )

Variable Documentation

◆ trace

basic::Tracer trace("fragmentpicker_integration_demo") ( "fragmentpicker_integration_demo" )

static