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Rosetta
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#include <iostream>#include <string>#include <sstream>#include <numeric/random/random.hh>#include <protocols/jobdist/standard_mains.hh>#include <protocols/moves/Mover.hh>#include <protocols/relax/ClassicRelax.hh>#include <protocols/moves/MonteCarlo.hh>#include <protocols/backrub/BackrubMover.hh>#include <devel/init.hh>#include <basic/Tracer.hh>#include <basic/options/option.hh>#include <basic/options/option_macros.hh>#include <basic/options/keys/in.OptionKeys.gen.hh>#include <basic/options/keys/backrub.OptionKeys.gen.hh>#include <basic/options/keys/out.OptionKeys.gen.hh>#include <basic/options/keys/canonical_sampling.OptionKeys.gen.hh>#include <core/chemical/ResidueType.hh>#include <core/chemical/ResidueTypeSet.hh>#include <core/chemical/ChemicalManager.hh>#include <core/pose/Pose.hh>#include <core/import_pose/import_pose.hh>#include <core/scoring/ScoreFunction.hh>#include <core/scoring/ScoreFunctionFactory.hh>#include <utility/excn/Exceptions.hh>Functions | |
| void | use_backrub (core::pose::PoseOP &pose, core::scoring::ScoreFunctionOP scorefxn) |
| int | main (int argc, char *argv[]) |
| int main | ( | int | argc, |
| char * | argv[] | ||
| ) |
References argv, utility::io::oc::cout, test.T009_Exceptions::e, pyrosetta.distributed.io::get_score_function(), basic::init(), option, kmeans_adaptive_kernel_density_bb_dependent_rotlib::p, beta_nonlocal::pose, pyrosetta.distributed.io::pose_from_file(), in::file::s(), oop_conformations::scorefxn, and use_backrub().
| void use_backrub | ( | core::pose::PoseOP & | pose, |
| core::scoring::ScoreFunctionOP | scorefxn | ||
| ) |
References utility::io::oc::cerr, create_a3b_hbs::i, mc, basic::options::OptionKeys::canonical_sampling::sampling::mc_kt, basic::options::OptionKeys::MonteCarlo::MonteCarlo, local::nstruct, out::nstruct(), option, test.T008_Serialization::oss, kmeans_adaptive_kernel_density_bb_dependent_rotlib::p, basic::options::OptionKeys::backrub::pivot_residues, beta_nonlocal::pose, oop_conformations::scorefxn, and gaussian-sampling::trial.
Referenced by main().