protocols::abinitio Namespace Reference

Classes
class	ApplicationContext
class	CustomAbinitio
class	PcaEvaluator
class	ShowViolation
class	ComputeTotalDistCst
class	Stage1Sampler
class	JumpSpecificAbrelax
	application level code for Abrelax, Foldconstraints and JumpingFoldconstraints More...
class	Application

Typedefs
typedef std::pair< core::pose::Pose, core::Real >	PoseWithScore

Functions
bool	sort_PoseWithScore (const PoseWithScore &left, const PoseWithScore &right)

Variables
static basic::Tracer	tr ("main")

Typedef Documentation

PoseWithScore

typedef std::pair< core::pose::Pose, core::Real > protocols::abinitio::PoseWithScore

Function Documentation

sort_PoseWithScore()

bool protocols::abinitio::sort_PoseWithScore	(	const PoseWithScore &	left,
		const PoseWithScore &	right
	)

References basic::options::OptionKeys::ufv::left, and basic::options::OptionKeys::ufv::right.

Referenced by protocols::abinitio::JumpSpecificAbrelax::multi_fast_relax().

Variable Documentation

tr

basic::Tracer protocols::abinitio::tr("main") ( "main"  )

static

Referenced by protocols::abinitio::JumpSpecificAbrelax::add_constraints(), protocols::abinitio::ApplicationContext::ApplicationContext(), protocols::abinitio::JumpSpecificAbrelax::check_filters(), protocols::abinitio::JumpSpecificAbrelax::close_loops(), protocols::abinitio::Application::copy_native_structure(), protocols::abinitio::JumpSpecificAbrelax::copy_native_structure(), protocols::abinitio::JumpSpecificAbrelax::copy_structure(), protocols::abinitio::JumpSpecificAbrelax::do_distributed_rerun(), protocols::abinitio::JumpSpecificAbrelax::do_rerun(), protocols::abinitio::JumpSpecificAbrelax::fold(), protocols::abinitio::JumpSpecificAbrelax::generate_extended_pose(), protocols::abinitio::JumpSpecificAbrelax::initialize_constraint_forest(), protocols::abinitio::Application::run(), protocols::abinitio::JumpSpecificAbrelax::setup(), protocols::abinitio::JumpSpecificAbrelax::setup_fold(), protocols::abinitio::JumpSpecificAbrelax::setup_fragments(), protocols::abinitio::JumpSpecificAbrelax::setup_jumps(), and protocols::abinitio::JumpSpecificAbrelax::setup_templates().