|
Rosetta
|
#include <protocols/jobdist/JobDistributors.hh>#include <protocols/jobdist/Jobs.hh>#include <protocols/abinitio/AbrelaxApplication.hh>#include <core/kinematics/util.hh>#include <protocols/abinitio/ClassicAbinitio.hh>#include <protocols/abinitio/FoldConstraints.hh>#include <protocols/abinitio/JumpingFoldConstraints.hh>#include <protocols/abinitio/Templates.hh>#include <protocols/abinitio/TemplateJumpSetup.hh>#include <protocols/abinitio/PairingStatistics.hh>#include <protocols/abinitio/StrandConstraints.hh>#include <protocols/abinitio/FragmentMover.hh>#include <protocols/Protocol.hh>#include <protocols/relax_protocols.hh>#include <protocols/jumping/SheetBuilder.hh>#include <protocols/jumping/JumpSetup.hh>#include <core/scoring/dssp/PairingsList.hh>#include <protocols/jumping/ResiduePairJumpSetup.hh>#include <protocols/jumping/SecondaryStructure.hh>#include <protocols/jumping/StrandPairing.hh>#include <protocols/jumping/util.hh>#include <core/types.hh>#include <core/pose/Pose.hh>#include <core/pose/util.hh>#include <basic/MetricValue.hh>#include <basic/options/option.hh>#include <basic/options/after_opts.hh>#include <core/fragment/ConstantLengthFragSet.hh>#include <core/fragment/BBTorsionSRFD.hh>#include <core/fragment/util.hh>#include <core/fragment/FragmentIO.hh>#include <core/chemical/ChemicalManager.hh>#include <core/conformation/util.hh>#include <core/io/silent/SilentFileData.hh>#include <core/scoring/constraints/ConstraintSet.hh>#include <core/scoring/constraints/ConstraintIO.hh>#include <core/scoring/func/HarmonicFunc.hh>#include <protocols/pose_metric_calculators/ClashCountCalculator.hh>#include <core/io/pdb/pdb_writer.hh>#include <core/io/silent/silent.fwd.hh>#include <core/io/silent/ProteinSilentStruct.hh>#include <core/scoring/ScoreFunction.fwd.hh>#include <core/scoring/ScoreType.hh>#include <core/scoring/ScoreFunctionFactory.hh>#include <core/scoring/func/Func.hh>#include <core/scoring/rms_util.hh>#include <core/scoring/constraints/BoundConstraint.hh>#include <core/sequence/util.hh>#include <protocols/evaluation/PoseEvaluator.hh>#include <protocols/evaluation/RmsdEvaluator.hh>#include <protocols/evaluation/JumpEvaluator.hh>#include <protocols/evaluation/TimeEvaluator.hh>#include <protocols/evaluation/PCA.hh>#include <protocols/evaluation/PoseMetricEvaluator.hh>#include <protocols/evaluation/ConstraintEvaluator.hh>#include <protocols/loops/SlidingWindowLoopClosure.hh>#include <protocols/loops/ShortLoopClosure.hh>#include <protocols/loops/LoopClosure.hh>#include <protocols/loops/LoopClass.hh>#include <protocols/loops/util.hh>#include <protocols/loops/looprelax_protocols.hh>#include <protocols/filters/Filter.hh>#include <protocols/simple_filters/RGFilter.hh>#include <protocols/simple_filters/COFilter.hh>#include <protocols/simple_filters/SheetFilter.hh>#include <protocols/abinitio/KinematicTaskControl.hh>#include <numeric/random/random.hh>#include <basic/options/option_macros.hh>#include <utility/io/izstream.hh>#include <utility/vector1.hh>#include <basic/Tracer.hh>#include <utility/io/util.hh>#include <utility/excn/Exceptions.hh>#include <cstdlib>#include <string>#include <vector>#include <protocols/rbsegment_relaxRelax_main.hh>#include <protocols/loop_build/LoopBuild.hh>#include <protocols/ligand_docking/ligand_dock_impl.hh>#include <protocols/abinitio/vs_test.hh>#include <protocols/protein_interface_design/conditional_jobdist_mover.hh>#include <protocols/protein_interface_design/setup_dockdesign_mover.hh>#include <devel/init.hh>#include <utility/exit.hh>#include <utility/string_util.hh>#include <basic/options/keys/out.OptionKeys.gen.hh>#include <basic/options/keys/run.OptionKeys.gen.hh>#include <basic/options/keys/in.OptionKeys.gen.hh>#include <core/import_pose/import_pose.hh>Functions | |
| int | main (int argc, char *argv[]) |
| Must have this after BOINC stuff to avoid windows build error. More... | |
| int main | ( | int | argc, |
| char * | argv[] | ||
| ) |
Must have this after BOINC stuff to avoid windows build error.
References basic::options::OptionKeys::abinitio::abinitio, argv, run::checkpoint(), run::checkpoint_interval(), test.T009_Exceptions::e, in::file::frag3(), in::file::frag9(), in::file::fragA(), in::file::fragB(), basic::init(), max(), basic::options::OptionKeys::in::file::movemap, docking::native_pose, local::nstruct, out::nstruct(), option, register_options(), and basic::options::OptionKeys::inout::dbms::user.
1.9.1