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Rosetta
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#include <devel/init.hh>#include <basic/options/option.hh>#include <basic/options/option_macros.hh>#include <basic/options/keys/in.OptionKeys.gen.hh>#include <basic/options/keys/score.OptionKeys.gen.hh>#include <core/chemical/ChemicalManager.hh>#include <core/chemical/ResidueTypeSet.hh>#include <core/conformation/ResidueFactory.hh>#include <core/scoring/ScoreFunction.hh>#include <core/scoring/ScoreFunctionFactory.hh>#include <core/scoring/Energies.hh>#include <core/pose/Pose.hh>#include <core/conformation/Residue.hh>#include <core/import_pose/import_pose.hh>#include <core/io/pdb/pdb_writer.hh>#include <core/pack/rotamer_set/RotamerSet.hh>#include <core/pack/rotamer_set/RotamerSets.hh>#include <core/pack/dunbrack/RotamerLibrary.hh>#include <core/pack/dunbrack/DunbrackRotamer.hh>#include <core/pack/dunbrack/SingleResidueDunbrackLibrary.hh>#include <utility/string_util.hh>#include <utility/io/izstream.hh>#include <utility/vector1.hh>#include <iostream>#include <fstream>#include <cmath>Functions | |
| utility::vector1< Real > | set_chival (Size nchi, Size &nbin) |
| void | scan_energy (pose::Pose &pose, int const &resno, Size const &nchi, scoring::ScoreFunctionOP sfxn, std::string const &prefix) |
| void | scan_rotamer (pose::Pose const &pose, scoring::ScoreFunctionOP const &sfxn, Size const &ir) |
| void | scan_neutral (pose::Pose const &pose, scoring::ScoreFunctionOP sfxn, std::string const &prefix) |
| int | main (int argc, char *argv[]) |
| int main | ( | int | argc, |
| char * | argv[] | ||
| ) |
| void scan_energy | ( | pose::Pose & | pose, |
| int const & | resno, | ||
| Size const & | nchi, | ||
| scoring::ScoreFunctionOP | sfxn, | ||
| std::string const & | prefix | ||
| ) |
References enumerate_junctions::int, beta_nonlocal::pose, create_a3b_hbs::prefix, set_chival(), and test.T120_core::sfxn.
Referenced by main(), and scan_neutral().
| void scan_neutral | ( | pose::Pose const & | pose, |
| scoring::ScoreFunctionOP | sfxn, | ||
| std::string const & | prefix | ||
| ) |
References lactamize::filename, create_a3b_hbs::ii, beta_nonlocal::pose, create_a3b_hbs::prefix, scan_energy(), test.T120_core::sfxn, and challenge::ss.
Referenced by main().
| void scan_rotamer | ( | pose::Pose const & | pose, |
| scoring::ScoreFunctionOP const & | sfxn, | ||
| Size const & | ir | ||
| ) |
References utility::io::oc::cout, create_a3b_hbs::j, beta_nonlocal::jj, beta_nonlocal::pose, create_a3b_hbs::score, and test.T120_core::sfxn.
Referenced by main().
| utility::vector1< Real > set_chival | ( | Size | nchi, |
| Size & | nbin | ||
| ) |
References enumerate_junctions::int.
Referenced by scan_energy().