dump_capped_residue.cc File Reference

Useful utility: given an amino/nucleic acid name, dump a polymerically capped version as PDB. More...

#include <core/pose/Pose.hh>
#include <core/conformation/Conformation.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/kinematics/MoveMap.fwd.hh>
#include <protocols/ncbb/util.hh>
#include <protocols/minimization_packing/MinMover.hh>
#include <devel/init.hh>
#include <basic/options/util.hh>
#include <basic/options/option.hh>
#include <basic/Tracer.hh>
#include <string>
#include <sstream>
#include <basic/options/keys/OptionKeys.hh>

Namespaces
	dumper

Functions
int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR ("DumpCapped")
StringOptionKey const	dumper::residue_name ("dumper:residue_name")
BooleanOptionKey const	dumper::nopatch ("dumper:nopatch")
BooleanOptionKey const	dumper::fiveprime ("dumper:fiveprime")

Detailed Description

Useful utility: given an amino/nucleic acid name, dump a polymerically capped version as PDB.

Author

Andy Watkins (amw57.nosp@m.9@st.nosp@m.anfor.nosp@m.d.ed.nosp@m.u)

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, test.T009_Exceptions::e, dumper::fiveprime, basic::database::full_name(), create_a3b_hbs::ii, basic::init(), min(), beta_nonlocal::mm, dumper::nopatch, option, beta_nonlocal::pose, res, erraser_analysis::res2, dumper::residue_name, lactamize::residue_set_cap, TR, and value.

Variable Documentation

TR

basic::Tracer TR("DumpCapped") ( "DumpCapped"  )

static

Referenced by main().