min_pack_min.hh File Reference

#include <devel/init.hh>
#include <core/pose/Pose.hh>
#include <core/pose/Pose.fwd.hh>
#include <core/pose/annotated_sequence.hh>
#include <core/pose/util.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/util/SwitchResidueTypeSet.hh>
#include <core/import_pose/pose_stream/util.hh>
#include <core/import_pose/pose_stream/MetaPoseInputStream.hh>
#include <core/import_pose/import_pose.hh>
#include <protocols/electron_density/util.hh>
#include <protocols/electron_density/SetupForDensityScoringMover.hh>
#include <protocols/minimization_packing/MinMover.hh>
#include <protocols/rigid/RB_geometry.hh>
#include <protocols/minimization_packing/PackRotamersMover.hh>
#include <core/pack/task/operation/TaskOperations.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/kinematics/Jump.hh>
#include <core/scoring/electron_density/ElectronDensity.hh>
#include <core/scoring/rms_util.hh>
#include <core/scoring/rms_util.tmpl.hh>
#include <core/scoring/Energies.hh>
#include <core/sequence/util.hh>
#include <core/sequence/Sequence.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <ObjexxFCL/format.hh>
#include <numeric/xyzMatrix.hh>
#include <numeric/xyzVector.hh>
#include <numeric/xyzVector.io.hh>
#include <basic/Tracer.hh>
#include <iosfwd>
#include <string>
#include <algorithm>
#include <apps/pilot/rayyrw/util.hh>

Classes
class	MinPackMin

Macros
#define	apps_pilot_rayyrw_min_pack_min_hh

Variables
static basic::Tracer	tr ("MinPackMin")
static basic::Tracer	rbmin ("MinPackMin.rigid_body_minimization")
static basic::Tracer	bbmin ("MinPackMin.backbone_minimization")
static basic::Tracer	pack_sc ("MinPackMin.pack_sidechains")

Macro Definition Documentation

apps_pilot_rayyrw_min_pack_min_hh

#define apps_pilot_rayyrw_min_pack_min_hh

Variable Documentation

bbmin

basic::Tracer bbmin("MinPackMin.backbone_minimization") ( "MinPackMin.backbone_minimization"  )

static

Referenced by MinPackMin::backbone_minimization().

pack_sc

basic::Tracer pack_sc("MinPackMin.pack_sidechains") ( "MinPackMin.pack_sidechains"  )

static

Referenced by MinPackMin::pack_sidechains().

rbmin

basic::Tracer rbmin("MinPackMin.rigid_body_minimization") ( "MinPackMin.rigid_body_minimization"  )

static

Referenced by MinPackMin::backbone_minimization(), and MinPackMin::rigid_body_minimization().

tr

basic::Tracer tr("MinPackMin") ( "MinPackMin"  )

static