explosion_error Namespace Reference

Functions
def	backbone_filter (model, atom, position)
def	distance (coordinates)

Variables
	parser = argparse.ArgumentParser()
	type
	action
	int
	default
	arguments = parser.parse_args()
	directory = os.path.join(arguments.job, 'trajectory')
	paths = os.listdir(directory)
	count = len(paths)
	models = arange(count)
	error = zeros(count)
	reference = None
	path = os.path.join(directory, subpath)
	model = biophysics.Model(path)
	solutions = file.readlines()
	output
	dpi

Function Documentation

backbone_filter()

def explosion_error.backbone_filter	(		model,
			atom,
			position
	)

distance()

def explosion_error.distance

(

coordinates

)

Variable Documentation

action

explosion_error.action

arguments

explosion_error.arguments = parser.parse_args()

count

explosion_error.count = len(paths)

default

explosion_error.default

directory

explosion_error.directory = os.path.join(arguments.job, 'trajectory')

dpi

explosion_error.dpi

error

explosion_error.error = zeros(count)

int

explosion_error.int

model

explosion_error.model = biophysics.Model(path)

models

explosion_error.models = arange(count)

output

explosion_error.output

parser

explosion_error.parser = argparse.ArgumentParser()

path

explosion_error.path = os.path.join(directory, subpath)

paths

explosion_error.paths = os.listdir(directory)

reference

explosion_error.reference = None

solutions

explosion_error.solutions = file.readlines()

type

explosion_error.type