ligand_rpkmin_jd1.cc File Reference

#include <devel/init.hh>
#include <core/types.hh>
#include <core/conformation/Residue.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/optimization/MinimizerOptions.hh>
#include <core/pack/rotamer_set/UnboundRotamersOperation.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pose/Pose.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/pack/dunbrack/RotamerConstraint.hh>
#include <protocols/jobdist/standard_mains.hh>
#include <protocols/ligand_docking/LigandBaseProtocol.hh>
#include <protocols/minimization_packing/MinMover.hh>
#include <protocols/moves/Mover.hh>
#include <protocols/minimization_packing/PackRotamersMover.hh>
#include <protocols/minimization_packing/RotamerTrialsMover.hh>
#include <basic/options/option_macros.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/packing.OptionKeys.gen.hh>
#include <basic/options/keys/docking.OptionKeys.gen.hh>
#include <core/pack/task/ResidueLevelTask.hh>

Classes
class	LigandRepackMinimizeProtocol

Typedefs
using	LigandRepackMinimizeProtocolOP = utility::pointer::shared_ptr< LigandRepackMinimizeProtocol >
using	LigandRepackMinimizeProtocolCOP = utility::pointer::shared_ptr< const LigandRepackMinimizeProtocol >

Functions
int	main (int argc, char *argv[])

Typedef Documentation

LigandRepackMinimizeProtocolCOP

using LigandRepackMinimizeProtocolCOP = utility::pointer::shared_ptr<const LigandRepackMinimizeProtocol>

LigandRepackMinimizeProtocolOP

using LigandRepackMinimizeProtocolOP = utility::pointer::shared_ptr<LigandRepackMinimizeProtocol>

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, in::path::database(), test.T009_Exceptions::e, packing::ex1::ex1(), packing::ex1aro::ex1aro(), packing::ex2::ex2(), in::file::extra_res_fa(), packing::extrachi_cutoff(), packing::flip_HNQ(), basic::init(), packing::no_optH(), out::nstruct(), docking::ligand::old_estat(), OPT, out::path::pdb(), in::file::s(), docking::ligand::soft_rep(), and packing::unboundrot().