min_test.cc File Reference

#include <core/types.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/optimization/AtomTreeMinimizer.hh>
#include <core/optimization/CartesianMinimizer.hh>
#include <core/optimization/symmetry/SymAtomTreeMinimizer.hh>
#include <core/optimization/MinimizerOptions.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <core/scoring/func/HarmonicFunc.hh>
#include <core/scoring/constraints/CoordinateConstraint.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/pose/symmetry/util.hh>
#include <core/conformation/symmetry/util.hh>
#include <core/conformation/Conformation.hh>
#include <core/conformation/Residue.hh>
#include <core/pack/task/PackerTask.fwd.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pack/task/operation/TaskOperations.hh>
#include <protocols/minimization_packing/PackRotamersMover.hh>
#include <protocols/minimization_packing/symmetry/SymPackRotamersMover.hh>
#include <core/pose/util.hh>
#include <protocols/membrane/AddMembraneMover.hh>
#include <core/scoring/electron_density/util.hh>
#include <basic/options/option.hh>
#include <devel/init.hh>
#include <protocols/symmetry/SetupForSymmetryMover.hh>
#include <protocols/electron_density/SetupForDensityScoringMover.hh>
#include <protocols/viewer/viewers.hh>
#include <protocols/moves/Mover.fwd.hh>
#include <protocols/jd2/JobDistributor.hh>
#include <protocols/jd2/JobDistributorFactory.hh>
#include <protocols/jd2/SilentFileJobOutputter.hh>
#include <utility/vector1.hh>
#include <protocols/constraint_movers/ConstraintSetMover.hh>
#include <core/scoring/constraints/util.hh>
#include <utility/excn/Exceptions.hh>
#include <basic/options/option_macros.hh>
#include <basic/options/keys/constraints.OptionKeys.gen.hh>
#include <basic/options/keys/symmetry.OptionKeys.gen.hh>
#include <basic/options/keys/edensity.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/relax.OptionKeys.gen.hh>
#include <devel/dna/relax_util.hh>
#include <core/scoring/dna/setup.hh>
#include <iostream>
#include <string>
#include <core/import_pose/import_pose.hh>
#include <basic/Tracer.hh>
#include <ObjexxFCL/FArray2D.hh>

Classes
class	MinTestMover

Functions
bool	rama_list_pred (const std::pair< core::Size, core::Real > &left, const std::pair< core::Size, core::Real > &right)
void *	my_main (void *)
int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR ("min_test")

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, ss_finder::cart, basic::options::OptionKeys::ddg::cartesian, basic::options::OptionKeys::msd::debug, basic::options::OptionKeys::dna::dna, basic::options::OptionKeys::relax::dualspace, test.T009_Exceptions::e, basic::init(), my_main(), NEW_OPT, vancomycin::pack, basic::options::OptionKeys::msd::ramp, and viewer_main().

my_main()

void* my_main

(

void *

)

References utility::io::oc::cerr, option, and utility::excn::Exception::show().

Referenced by main().

rama_list_pred()

bool rama_list_pred	(	const std::pair< core::Size, core::Real > &	left,
		const std::pair< core::Size, core::Real > &	right
	)

References basic::options::OptionKeys::ufv::left, and basic::options::OptionKeys::ufv::right.

Variable Documentation

TR

basic::Tracer TR("min_test") ( "min_test"  )

static

Referenced by MinTestMover::add_coordinate_constraints_to_pose(), MinTestMover::apply(), and MinTestMover::set_foldtree_for_variable_movement().