chrisk Namespace Reference

Variables
basic::options::StringOptionKey	tag ("chrisk:tag")
basic::options::StringOptionKey	insert_pdb ("chrisk:insert_pdb")
basic::options::RealOptionKey	rt_tol ("chrisk:rt_tol")
basic::options::RealOptionKey	rmsd_tol ("chrisk:rmsd_tol")
basic::options::IntegerOptionKey	seqsep_tol ("chrisk:seqsep_tol")
basic::options::IntegerOptionKey	term_tol ("chrisk:term_tol")
basic::options::IntegerOptionKey	trim_tol ("chrisk:trim_tol")
basic::options::IntegerOptionKey	nterm_in ("chrisk:nterm_in")
basic::options::IntegerOptionKey	cterm_in ("chrisk:cterm_in")
basic::options::BooleanOptionKey	loops_only ("chrisk:loops_only")
basic::options::RealOptionKey	design_radius ("chrisk:design_radius")
basic::options::RealOptionKey	repack_radius ("chrisk:repack_radius")
basic::options::IntegerOptionKey	n_add_linker ("chrisk:n_add_linker")

Variable Documentation

cterm_in

basic::options::IntegerOptionKey chrisk::cterm_in("chrisk:cterm_in")

(

"chrisk:cterm_in"

)

Referenced by go(), and main().

design_radius

basic::options::RealOptionKey chrisk::design_radius("chrisk:design_radius")

(

"chrisk:design_radius"

)

Referenced by go(), and main().

insert_pdb

basic::options::StringOptionKey chrisk::insert_pdb("chrisk:insert_pdb")

(

"chrisk:insert_pdb"

)

Referenced by go(), and main().

loops_only

basic::options::BooleanOptionKey chrisk::loops_only("chrisk:loops_only")

(

"chrisk:loops_only"

)

Referenced by find_backbone_rts_in_pose(), find_cutpair_alignments_in_pose(), find_nonlocal_segment_alignments_in_pose(), go(), and main().

n_add_linker

basic::options::IntegerOptionKey chrisk::n_add_linker("chrisk:n_add_linker")

(

"chrisk:n_add_linker"

)

Referenced by dump_insert_pdb_and_remodel_blueprint(), go(), and main().

nterm_in

basic::options::IntegerOptionKey chrisk::nterm_in("chrisk:nterm_in")

(

"chrisk:nterm_in"

)

Referenced by go(), and main().

repack_radius

basic::options::RealOptionKey chrisk::repack_radius("chrisk:repack_radius")

(

"chrisk:repack_radius"

)

Referenced by design_cluster(), go(), and main().

rmsd_tol

basic::options::RealOptionKey chrisk::rmsd_tol("chrisk:rmsd_tol")

(

"chrisk:rmsd_tol"

)

Referenced by find_cutpair_alignments_in_pose(), find_nonlocal_segment_alignments_in_pose(), go(), and main().

rt_tol

basic::options::RealOptionKey chrisk::rt_tol("chrisk:rt_tol")

(

"chrisk:rt_tol"

)

Referenced by find_backbone_rts_in_pose(), go(), and main().

seqsep_tol

basic::options::IntegerOptionKey chrisk::seqsep_tol("chrisk:seqsep_tol")

(

"chrisk:seqsep_tol"

)

Referenced by find_backbone_rts_in_pose(), find_cutpair_alignments_in_pose(), find_nonlocal_segment_alignments_in_pose(), go(), and main().

tag

basic::options::StringOptionKey chrisk::tag("chrisk:tag")

(

"chrisk:tag"

)

Referenced by dump_insert_pdb_and_remodel_blueprint(), and main().

term_tol

basic::options::IntegerOptionKey chrisk::term_tol("chrisk:term_tol")

(

"chrisk:term_tol"

)

Referenced by find_backbone_rts_in_pose(), find_cutpair_alignments_in_pose(), find_nonlocal_segment_alignments_in_pose(), go(), and main().

trim_tol

basic::options::IntegerOptionKey chrisk::trim_tol("chrisk:trim_tol")

(

"chrisk:trim_tol"

)

Referenced by go(), and main().