sec_struct_finder.cc File Reference

#include <core/pose/Pose.fwd.hh>
#include <core/scoring/constraints/ConstraintSet.fwd.hh>
#include <protocols/jd2/JobDistributor.hh>
#include <protocols/ncbb/SecStructFinder.hh>
#include <devel/init.hh>
#include <basic/options/util.hh>
#include <basic/options/option.hh>
#include <basic/Tracer.hh>
#include <string>
#include <basic/options/keys/OptionKeys.hh>

Namespaces
	ss_finder

Functions
int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR ("SecStructFinder")
StringOptionKey const	ss_finder::residue ("ss_finder::residue")
IntegerOptionKey const	ss_finder::min_length ("ss_finder::min_length")
RealOptionKey const	ss_finder::bin_size ("ss_finder::bin_size")
IntegerOptionKey const	ss_finder::max_length ("ss_finder::max_length")
RealOptionKey const	ss_finder::dump_threshold ("ss_finder::dump_threshold")
StringOptionKey const	ss_finder::dihedral_pattern ("ss_finder::dihedral_pattern")
StringOptionKey const	ss_finder::alpha_beta_pattern ("ss_finder::alpha_beta_pattern")
BooleanOptionKey const	ss_finder::min_everything ("ss_finder::min_everything")
RealOptionKey const	ss_finder::dihedral_min ("ss_finder::dihedral_min")
RealOptionKey const	ss_finder::dihedral_max ("ss_finder::dihedral_max")
BooleanOptionKey const	ss_finder::cart ("ss_finder::cart")
BooleanOptionKey const	ss_finder::constrain ("ss_finder::constrain")
RealOptionKey const	ss_finder::dissimilarity ("ss_finder::dissimilarity")

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References ss_finder::alpha_beta_pattern, argv, ss_finder::bin_size, ss_finder::cart, ss_finder::constrain, ss_finder::dihedral_max, ss_finder::dihedral_min, ss_finder::dihedral_pattern, ss_finder::dissimilarity, ss_finder::dump_threshold, test.T009_Exceptions::e, basic::init(), ss_finder::max_length, ss_finder::min_everything, ss_finder::min_length, option, residue, and ss_finder::residue.

Variable Documentation

TR

basic::Tracer TR("SecStructFinder") ( "SecStructFinder"  )

static