willmatch Namespace Reference

Functions
BooleanOptionKey const	willmatch ("willmatch")
StringVectorOptionKey const	write_reduced_matchset ("willmatch:write_reduced_matchset")
RealOptionKey const	interface_size ("willmatch:interface_size")
RealOptionKey const	max_dis_any ("willmatch:max_dis_any")
RealOptionKey const	max_dis_all ("willmatch:max_dis_all")
RealOptionKey const	max_dis_hb ("willmatch:max_dis_hb")
RealOptionKey const	min_dis_hb ("willmatch:min_dis_hb")
RealOptionKey const	max_dis_hb_colinear ("willmatch:max_dis_hb_colinear")
RealOptionKey const	max_dis_metal ("willmatch:max_dis_metal")
RealOptionKey const	max_ang_metal ("willmatch:max_ang_metal")
RealOptionKey const	clash_dis ("willmatch:clash_dis")
RealOptionKey const	c2_linker_dist ("willmatch:c2_linker_dist")
RealOptionKey const	identical_match_dis ("willmatch:identical_match_dis")
RealOptionKey const	chi1_increment ("willmatch:chi1_increment")
RealOptionKey const	chi2_increment ("willmatch:chi2_increment")
RealOptionKey const	c2_symm_increment ("willmatch:c2_symm_increment")
RealOptionKey const	cb_sasa_thresh ("willmatch:cb_sasa_thresh")
BooleanOptionKey const	design_interface ("willmatch:design_interface")
FileOptionKey const	chilist ("willmatch:chilist")
FileOptionKey const	fixed_res ("willmatch:fixed_res")
FileOptionKey const	native1 ("willmatch:native1")
FileOptionKey const	native2 ("willmatch:native2")
FileOptionKey const	exclude_res1 ("willmatch:exclude_res1")
FileOptionKey const	exclude_res2 ("willmatch:exclude_res2")
FileOptionKey const	taglist ("willmatch:taglist")
IntegerVectorOptionKey const	residues ("willmatch:residues")
BooleanOptionKey const	symmetry_d2 ("willmatch:symmetry_d2")
BooleanOptionKey const	symmetry_c2_dock ("willmatch:symmetry_c2_dock")
IntegerVectorOptionKey const	splitwork ("willmatch:splitwork")
BooleanOptionKey const	exclude_ala ("willmatch:exclude_ala")
RealOptionKey const	match_overlap_dis ("willmatch:match_overlap_dis")
RealOptionKey const	match_overlap_ang ("willmatch:match_overlap_ang")
IntegerVectorOptionKey const	forbid_residues ("willmatch:forbid_residues")
RealVectorOptionKey const	poi ("willmatch:poi")
RealOptionKey const	poidis ("willmatch:poidis")
BooleanOptionKey const	homodimer ("willmatch:homodimer")
RealOptionKey const	fa_dun_thresh ("willmatch:fa_dun_thresh")

Function Documentation

c2_linker_dist()

RealOptionKey const willmatch::c2_linker_dist

(

"willmatch:c2_linker_dist"

)

c2_symm_increment()

RealOptionKey const willmatch::c2_symm_increment

(

"willmatch:c2_symm_increment"

)

cb_sasa_thresh()

RealOptionKey const willmatch::cb_sasa_thresh

(

"willmatch:cb_sasa_thresh"

)

chi1_increment()

RealOptionKey const willmatch::chi1_increment

(

"willmatch:chi1_increment"

)

chi2_increment()

RealOptionKey const willmatch::chi2_increment

(

"willmatch:chi2_increment"

)

chilist()

FileOptionKey const willmatch::chilist

(

"willmatch:chilist"

)

clash_dis()

RealOptionKey const willmatch::clash_dis

(

"willmatch:clash_dis"

)

design_interface()

BooleanOptionKey const willmatch::design_interface

(

"willmatch:design_interface"

)

exclude_ala()

BooleanOptionKey const willmatch::exclude_ala

(

"willmatch:exclude_ala"

)

exclude_res1()

FileOptionKey const willmatch::exclude_res1

(

"willmatch:exclude_res1"

)

Referenced by run().

exclude_res2()

FileOptionKey const willmatch::exclude_res2

(

"willmatch:exclude_res2"

)

fa_dun_thresh()

RealOptionKey const willmatch::fa_dun_thresh

(

"willmatch:fa_dun_thresh"

)

fixed_res()

FileOptionKey const willmatch::fixed_res

(

"willmatch:fixed_res"

)

forbid_residues()

IntegerVectorOptionKey const willmatch::forbid_residues

(

"willmatch:forbid_residues"

)

homodimer()

BooleanOptionKey const willmatch::homodimer

(

"willmatch:homodimer"

)

identical_match_dis()

RealOptionKey const willmatch::identical_match_dis

(

"willmatch:identical_match_dis"

)

interface_size()

RealOptionKey const willmatch::interface_size

(

"willmatch:interface_size"

)

match_overlap_ang()

RealOptionKey const willmatch::match_overlap_ang

(

"willmatch:match_overlap_ang"

)

match_overlap_dis()

RealOptionKey const willmatch::match_overlap_dis

(

"willmatch:match_overlap_dis"

)

max_ang_metal()

RealOptionKey const willmatch::max_ang_metal

(

"willmatch:max_ang_metal"

)

max_dis_all()

RealOptionKey const willmatch::max_dis_all

(

"willmatch:max_dis_all"

)

max_dis_any()

RealOptionKey const willmatch::max_dis_any

(

"willmatch:max_dis_any"

)

max_dis_hb()

RealOptionKey const willmatch::max_dis_hb

(

"willmatch:max_dis_hb"

)

max_dis_hb_colinear()

RealOptionKey const willmatch::max_dis_hb_colinear

(

"willmatch:max_dis_hb_colinear"

)

max_dis_metal()

RealOptionKey const willmatch::max_dis_metal

(

"willmatch:max_dis_metal"

)

min_dis_hb()

RealOptionKey const willmatch::min_dis_hb

(

"willmatch:min_dis_hb"

)

native1()

FileOptionKey const willmatch::native1

(

"willmatch:native1"

)

native2()

FileOptionKey const willmatch::native2

(

"willmatch:native2"

)

poi()

RealVectorOptionKey const willmatch::poi

(

"willmatch:poi"

)

poidis()

RealOptionKey const willmatch::poidis

(

"willmatch:poidis"

)

residues()

IntegerVectorOptionKey const willmatch::residues

(

"willmatch:residues"

)

splitwork()

IntegerVectorOptionKey const willmatch::splitwork

(

"willmatch:splitwork"

)

symmetry_c2_dock()

BooleanOptionKey const willmatch::symmetry_c2_dock

(

"willmatch:symmetry_c2_dock"

)

symmetry_d2()

BooleanOptionKey const willmatch::symmetry_d2

(

"willmatch:symmetry_d2"

)

taglist()

FileOptionKey const willmatch::taglist

(

"willmatch:taglist"

)

willmatch()

BooleanOptionKey const willmatch::willmatch

(

"willmatch"

)

write_reduced_matchset()

StringVectorOptionKey const willmatch::write_reduced_matchset

(

"willmatch:write_reduced_matchset"

)