dbscan_adaptive_kernel_density_bb_dependent_rotlib Namespace Reference

Functions
def	parse_opt (opts)
def	load_data (restyp)
def	plot_cluster (X, core_samples, labels, R)
def	main ()

Detailed Description

dbscan_adaptive_kernel_density_bb_dependent_rotlib.py

Usage:
  dakdbbd.py <AA> [<eps>] [<nbcut>]
  dakdbbd.py (-h | --help)
  dakdbbd.py --version

Options:
  -h --help    Show this screen.
  AA           residue type
  eps          eps parameter in dbscan
  nbcut        neighbour cutoff in dbscan

Function Documentation

load_data()

def dbscan_adaptive_kernel_density_bb_dependent_rotlib.load_data

(

restyp

)

References run_backbone.float, ObjexxFCL.len(), and basic::database.open().

Referenced by main().

main()

def dbscan_adaptive_kernel_density_bb_dependent_rotlib.main

(

)

References PREcst.fit(), ObjexxFCL.len(), load_data(), parse_opt(), plot_cluster(), print(), and set().

parse_opt()

def dbscan_adaptive_kernel_density_bb_dependent_rotlib.parse_opt

(

opts

)

References run_backbone.float, and enumerate_junctions.int.

Referenced by main().

plot_cluster()

def dbscan_adaptive_kernel_density_bb_dependent_rotlib.plot_cluster	(		X,
			core_samples,
			labels,
			R
	)

References ObjexxFCL.len(), set(), and basic::options::OptionKeys::in::file.zip.

Referenced by main().