DenovoProteinDesign Namespace Reference

Functions
BooleanOptionKey const	DenovoProteinDesign ("DenovoProteinDesign")
BooleanOptionKey const	redesign_core ("DenovoProteinDesign:redesign_core")
BooleanOptionKey const	redesign_loops ("DenovoProteinDesign:redesign_loops")
BooleanOptionKey const	redesign_surface ("DenovoProteinDesign:redesign_surface")
BooleanOptionKey const	redesign_complete ("DenovoProteinDesign:redesign_complete")
BooleanOptionKey const	optimize_loops ("DenovoProteinDesign:optimize_loops")
FileOptionKey const	secondary_structure_file ("DenovoProteinDesign:secondary_structure_file")
FileOptionKey const	hydrophobic_polar_pattern ("DenovoProteinDesign:hydrophobic_polar_pattern")
BooleanOptionKey const	use_template_sequence ("DenovoProteinDesign:use_template_sequence")
BooleanOptionKey const	use_template_topology ("DenovoProteinDesign:use_template_topology")
FileOptionKey const	create_from_template_pdb ("DenovoProteinDesign:create_from_template_pdb")
BooleanOptionKey const	create_from_secondary_structure ("DenovoProteinDesign:create_from_secondary_structure")

Function Documentation

create_from_secondary_structure()

BooleanOptionKey const DenovoProteinDesign::create_from_secondary_structure

(

"DenovoProteinDesign:create_from_secondary_structure"

)

create_from_template_pdb()

FileOptionKey const DenovoProteinDesign::create_from_template_pdb

(

"DenovoProteinDesign:create_from_template_pdb"

)

DenovoProteinDesign()

BooleanOptionKey const DenovoProteinDesign::DenovoProteinDesign

(

"DenovoProteinDesign"

)

hydrophobic_polar_pattern()

FileOptionKey const DenovoProteinDesign::hydrophobic_polar_pattern

(

"DenovoProteinDesign:hydrophobic_polar_pattern"

)

optimize_loops()

BooleanOptionKey const DenovoProteinDesign::optimize_loops

(

"DenovoProteinDesign:optimize_loops"

)

redesign_complete()

BooleanOptionKey const DenovoProteinDesign::redesign_complete

(

"DenovoProteinDesign:redesign_complete"

)

redesign_core()

BooleanOptionKey const DenovoProteinDesign::redesign_core

(

"DenovoProteinDesign:redesign_core"

)

redesign_loops()

BooleanOptionKey const DenovoProteinDesign::redesign_loops

(

"DenovoProteinDesign:redesign_loops"

)

redesign_surface()

BooleanOptionKey const DenovoProteinDesign::redesign_surface

(

"DenovoProteinDesign:redesign_surface"

)

secondary_structure_file()

FileOptionKey const DenovoProteinDesign::secondary_structure_file

(

"DenovoProteinDesign:secondary_structure_file"

)

use_template_sequence()

BooleanOptionKey const DenovoProteinDesign::use_template_sequence

(

"DenovoProteinDesign:use_template_sequence"

)

use_template_topology()

BooleanOptionKey const DenovoProteinDesign::use_template_topology

(

"DenovoProteinDesign:use_template_topology"

)