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Rosetta
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#include <core/types.hh>#include <core/conformation/Residue.hh>#include <core/chemical/ResidueTypeSet.hh>#include <core/chemical/ResidueTypeSet.fwd.hh>#include <core/conformation/ResidueFactory.hh>#include <core/scoring/sasa.hh>#include <core/scoring/rms_util.hh>#include <core/scoring/ScoreFunction.hh>#include <core/scoring/ScoreFunctionFactory.hh>#include <core/scoring/constraints/ConstraintIO.hh>#include <core/scoring/constraints/ConstraintSet.hh>#include <core/scoring/constraints/ConstraintSet.fwd.hh>#include <core/scoring/constraints/AtomPairConstraint.hh>#include <core/scoring/func/HarmonicFunc.hh>#include <core/scoring/func/Func.hh>#include <core/id/AtomID_Map.hh>#include <core/id/AtomID.hh>#include <core/id/DOF_ID.hh>#include <core/kinematics/AtomTree.hh>#include <core/kinematics/Jump.hh>#include <core/kinematics/MoveMap.hh>#include <core/pose/Pose.hh>#include <core/pose/Pose.fwd.hh>#include <core/pose/PDBInfo.hh>#include <core/io/pdb/pdb_writer.hh>#include <devel/init.hh>#include <basic/options/util.hh>#include <basic/options/option.hh>#include <basic/options/after_opts.hh>#include <basic/options/keys/OptionKeys.hh>#include <basic/basic.hh>#include <basic/Tracer.hh>#include <basic/database/open.hh>#include <core/io/silent/SilentFileData.hh>#include <core/io/silent/ProteinSilentStruct.hh>#include <core/pack/pack_rotamers.hh>#include <core/pack/rotamer_trials.hh>#include <core/pack/task/PackerTask.hh>#include <core/pack/task/TaskFactory.hh>#include <core/optimization/AtomTreeMinimizer.hh>#include <core/optimization/MinimizerOptions.hh>#include <core/io/silent/silent.fwd.hh>#include <protocols/moves/MonteCarlo.hh>#include <protocols/moves/MoverContainer.hh>#include <protocols/minimization_packing/RotamerTrialsMover.hh>#include <protocols/moves/TrialMover.hh>#include <protocols/moves/RepeatMover.hh>#include <protocols/moves/Mover.hh>#include <protocols/simple_moves/ShakeStructureMover.hh>#include <utility/file/FileName.hh>#include <utility/vector1.hh>#include <utility/io/ozstream.hh>#include <utility/io/izstream.hh>#include <utility/excn/Exceptions.hh>#include <time.h>#include <fstream>#include <iostream>#include <string>#include <core/import_pose/import_pose.hh>Functions | |
| int | main (int argc, char *argv[]) |
| int main | ( | int | argc, |
| char * | argv[] | ||
| ) |
References argv, basic::options::OptionKeys::constraints::constraints, utility::io::oc::cout, test.T009_Exceptions::e, create_a3b_hbs::f, PREcst::fname, h, basic::init(), in::file::l(), basic::options::OptionKeys::in::file::list, basic::options::option, option, pdbs, beta_nonlocal::pose, pyrosetta.distributed.io::pose_from_file(), in::file::s(), basic::options::OptionKeys::frags::scoring::scoring, and basic::options::OptionKeys::inout::dbms::user.
1.9.1