pmut_scan_parallel.cc File Reference

Main function for running the point mutant scan protocol. More...

#include <protocols/pmut_scan/PointMutScanDriver.hh>
#include <protocols/pmut_scan/AlterSpecDisruptionDriver.hh>
#include <protocols/pmut_scan/Mutant.hh>
#include <devel/init.hh>
#include <basic/options/option.hh>
#include <basic/options/util.hh>
#include <basic/Tracer.hh>
#include <utility/file/file_sys_util.hh>
#include <utility/vector1.hh>
#include <utility/excn/Exceptions.hh>
#include <basic/options/keys/OptionKeys.hh>

Namespaces
	protocols
	demo program for implementing loop relax + FA relax
	protocols::pmut_scan

Functions
int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR ("apps.pmut_scan_parallel")
	Core headers. More...
basic::options::BooleanOptionKey const	protocols::pmut_scan::double_mutant_scan ("protocols::pmut_scan::double_mutant_scan")
basic::options::FileOptionKey const	protocols::pmut_scan::mutants_list ("protocols::pmut_scan::mutants_list")
basic::options::BooleanOptionKey const	protocols::pmut_scan::output_mutant_structures ("protocols::pmut_scan::output_mutant_structures")
basic::options::RealOptionKey const	protocols::pmut_scan::DDG_cutoff ("protocols::pmut_scan::DDG_cutoff")
basic::options::BooleanOptionKey const	protocols::pmut_scan::alter_spec_disruption_mode ("protocols::pmut_scan::alter_spec_disruption_mode")

Detailed Description

Main function for running the point mutant scan protocol.

Author

Ron Jacak (ron.j.nosp@m.acak.nosp@m.@gmai.nosp@m.l.co.nosp@m.m); Steven Lewis smlew.nosp@m.i@gm.nosp@m.ail.c.nosp@m.om

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References utility::options::OptionCollection::add(), protocols::pmut_scan::alter_spec_disruption_mode, argv, utility::io::oc::cerr, protocols::pmut_scan::DDG_cutoff, utility::options::ScalarOption_T_< K, T >::def(), protocols::pmut_scan::double_mutant_scan, test.T009_Exceptions::e, utility::file::file_exists(), basic::init(), protocols::pmut_scan::mutants_list, basic::options::option, protocols::pmut_scan::output_mutant_structures, basic::options::start_files(), basic::options::OptionKeys::inout::dbms::user, utility_exit, and value.

Variable Documentation

TR

basic::Tracer TR("apps.pmut_scan_parallel") ( "apps.pmut_scan_parallel"  )

static

Core headers.