|
| | test.Workshop7test.extra_options |
| |
| | test.Workshop7test.pose = pose_from_file("../test/data/workshops/complex.start.pdb") |
| |
| int | test.Workshop7test.jump_num = 1 |
| |
| | test.Workshop7test.pert_mover = rigid_moves.RigidBodyPerturbMover(jump_num, 8, 3) |
| |
| | test.Workshop7test.randomize1 = rigid_moves.RigidBodyRandomizeMover(pose, jump_num, rigid_moves.partner_upstream) |
| |
| | test.Workshop7test.randomize2 = rigid_moves.RigidBodyRandomizeMover(pose, jump_num, rigid_moves.partner_downstream) |
| |
| | test.Workshop7test.slid = protocols.docking.DockingSlideIntoContact(jump_num) |
| |
| | test.Workshop7test.slide = protocols.docking.FaDockingSlideIntoContact(jump_num) |
| |
| | test.Workshop7test.movemap = MoveMap() |
| |
| | test.Workshop7test.scorefxn = create_score_function("ref2015") |
| |
| | test.Workshop7test.min_mover = protocols.minimization_packing.MinMover() |
| |
| | test.Workshop7test.switch_low = SwitchResidueTypeSetMover("centroid") |
| |
| | test.Workshop7test.pose_high = Pose() |
| |
| | test.Workshop7test.pose_low = Pose() |
| |
| | test.Workshop7test.scorefxn_low = create_score_function("interchain_cen") |
| |
| | test.Workshop7test.dock_lowres = protocols.docking.DockingLowRes(scorefxn_low, jump_num) |
| |
| | test.Workshop7test.output = tempfile.mkstemp()[1] |
| |
| | test.Workshop7test.jd = PyJobDistributor(output, 10, scorefxn_low) |
| |
| | test.Workshop7test.native_pose = pose_from_file("../test/data/workshops/complex.high.pdb") |
| |
| | test.Workshop7test.starting_pose = Pose() |
| |
| | test.Workshop7test.scorefxn_high = create_score_function("ref2015.wts", "docking") |
| |
| | test.Workshop7test.dock_hires = protocols.docking.DockMCMProtocol() |
| |
| | test.Workshop7test.recover_sidechains = protocols.simple_moves.ReturnSidechainMover(pose_high) |
| |
