DynamicAggregateFunction.hh File Reference

Declaration for a file-driven definition for the active states in a multistate design and the set of mathematical expressions that together define the fitness function for the sequence being designed. More...

#include <protocols/pack_daemon/DynamicAggregateFunction.fwd.hh>
#include <protocols/pack_daemon/MultistateAggregateFunction.hh>
#include <core/types.hh>
#include <core/scoring/ScoreFunction.fwd.hh>
#include <numeric/expression_parser/Arithmetic.hh>
#include <utility/vector1.hh>
#include <utility/io/FileContentsMap.fwd.hh>
#include <utility/VirtualBase.hh>
#include <map>
#include <set>
#include <protocols/pack_daemon/PackDaemon.fwd.hh>

Classes
class	protocols::pack_daemon::VectorExpression
class	protocols::pack_daemon::VariableVectorExpression
class	protocols::pack_daemon::IterativeVectorExpression
class	protocols::pack_daemon::VectorFunction
class	protocols::pack_daemon::VectorFunction2
class	protocols::pack_daemon::Mean
class	protocols::pack_daemon::VMax
class	protocols::pack_daemon::VMin
class	protocols::pack_daemon::VMaxBy
	Take two vector expressions of equal length; returns the value from position i in expression 2 where position i is the position with the largest value in expression 1. More...
class	protocols::pack_daemon::VMinBy
	Take two vector expressions of equal length; returns the value from position i in expression 2 where position i is the position with the smallest value in expression 1. More...
class	protocols::pack_daemon::PowExpression
class	protocols::pack_daemon::ExpExpression
class	protocols::pack_daemon::LnExpression
class	protocols::pack_daemon::InSetExpression
	Returns "true" if the expression ex evaluates to one of a set of indicated values. More...
class	protocols::pack_daemon::SurrogateVariableExpression
	Stores the result of the surragate expression as if this expression were a variable, but defers to the root expression for questions of deriviatives and which variables are active (this is not a real variable). More...
class	protocols::pack_daemon::VectorExpressionCreator
class	protocols::pack_daemon::StructureFileNames
class	protocols::pack_daemon::DynamicAggregateFunction
class	protocols::pack_daemon::DynamicAggregateFunctionDriver
class	protocols::pack_daemon::EntityFuncExpressionCreator
class	protocols::pack_daemon::EntityFunc

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::pack_daemon

Detailed Description

Declaration for a file-driven definition for the active states in a multistate design and the set of mathematical expressions that together define the fitness function for the sequence being designed.

Author

Andrew Leaver-Fay (aleav.nosp@m.erfa.nosp@m.y@gma.nosp@m.il.c.nosp@m.om)