GridScorer.cc File Reference

#include <protocols/ligand_docking/GALigandDock/GridScorer.hh>
#include <protocols/ligand_docking/GALigandDock/GriddedAtomTreeMultifunc.hh>
#include <core/types.hh>
#include <core/pose/Pose.hh>
#include <core/chemical/AtomType.hh>
#include <core/chemical/AtomTypeSet.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/ResidueConnection.hh>
#include <core/conformation/Atom.hh>
#include <core/conformation/Residue.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/optimization/AtomTreeMinimizer.hh>
#include <core/optimization/Minimizer.hh>
#include <core/conformation/residue_datacache.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/ScoreType.hh>
#include <core/scoring/disulfides/DisulfideAtomIndices.hh>
#include <core/scoring/disulfides/FullatomDisulfidePotential.hh>
#include <core/scoring/etable/Etable.hh>
#include <core/energy_methods/CartesianBondedEnergy.hh>
#include <core/scoring/ScoringManager.hh>
#include <core/scoring/MinimizationGraph.hh>
#include <core/scoring/methods/EnergyMethodOptions.hh>
#include <core/scoring/hbonds/HBondDatabase.hh>
#include <core/scoring/hbonds/constants.hh>
#include <numeric/xyzVector.hh>
#include <numeric/xyz.functions.hh>
#include <numeric/random/random.hh>
#include <utility/vector1.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/dna.OptionKeys.gen.hh>
#include <basic/options/keys/corrections.OptionKeys.gen.hh>
#include <basic/Tracer.hh>
#include <ObjexxFCL/FArray3D.hh>
#include <ObjexxFCL/format.hh>
#include <core/optimization/MinimizerMap.hh>
#include <core/scoring/constraints/ConstraintSet.hh>
#include <core/scoring/electron_density/util.hh>
#include <core/scoring/etable/coulomb/Coulomb.hh>
#include <core/scoring/hbonds/hbonds_geom.hh>
#include <core/scoring/lkball/LK_BallEnergy.hh>
#include <core/scoring/electron_density/ElectronDensity.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::ligand_docking
	protocols::ligand_docking::ga_ligand_dock

Functions
static basic::Tracer	protocols::ligand_docking::ga_ligand_dock::TR ("protocols.ligand_docking.GALigandDock.GridScorer")
core::Real	protocols::ligand_docking::ga_ligand_dock::ipow (core::Real base, core::Size exp)
core::Real	protocols::ligand_docking::ga_ligand_dock::xform_rep (core::Real rep)
core::Real	protocols::ligand_docking::ga_ligand_dock::ixform_rep (core::Real xfrep)
core::Real	protocols::ligand_docking::ga_ligand_dock::dxform_rep (core::Real xfrep)
core::Real	protocols::ligand_docking::ga_ligand_dock::xform_atr (core::Real atr)
core::Real	protocols::ligand_docking::ga_ligand_dock::ixform_atr (core::Real xfatr)
core::Real	protocols::ligand_docking::ga_ligand_dock::dxform_atr (core::Real)

Detailed Description

Author

Hahnbeom Park and Frank DiMaio