HBNet.hh File Reference

base class HBNet; to detect and design h-bond networks More...

#include <protocols/hbnet/HBNet.fwd.hh>
#include <protocols/hbnet/NetworkState.fwd.hh>
#include <basic/datacache/DataMap.fwd.hh>
#include <utility/tag/Tag.fwd.hh>
#include <utility/vector1.hh>
#include <utility/vector0.hh>
#include <utility/graph/Graph.fwd.hh>
#include <utility/pointer/memory.hh>
#include <core/types.hh>
#include <core/pose/Pose.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/conformation/Residue.fwd.hh>
#include <core/pack/task/PackerTask.fwd.hh>
#include <core/pack/task/TaskFactory.fwd.hh>
#include <core/scoring/hbonds/graph/HBondGraph.fwd.hh>
#include <core/pack/interaction_graph/InteractionGraphBase.fwd.hh>
#include <core/id/AtomID.hh>
#include <core/select/residue_selector/ResidueSelector.fwd.hh>
#include <core/conformation/symmetry/SymmetryInfo.fwd.hh>
#include <core/pack/rotamer_set/RotamerLinks.fwd.hh>
#include <core/pack/rotamer_set/RotamerSets.hh>
#include <core/scoring/hbonds/HBondSet.fwd.hh>
#include <core/scoring/hbonds/HBondDatabase.fwd.hh>
#include <protocols/moves/Mover.hh>
#include <set>
#include <core/scoring/hbonds/graph/HBondGraph.hh>

Classes
struct	protocols::hbnet::HBondResStruct
	struct that represents minimal info for residue in an h-bond network More...
struct	protocols::hbnet::compare_hbond_residues
struct	protocols::hbnet::compare_hbond_resnums
struct	protocols::hbnet::HBondNetStruct
	struct that contains info needed for hbond networks More...
struct	protocols::hbnet::compare_net_vec
struct	protocols::hbnet::compare_by_x
struct	protocols::hbnet::DecoratedNetworkState
class	protocols::hbnet::HBNet

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::hbnet

Variables
static core::Real const	protocols::hbnet::MIN_HB_E_CUTOFF = { -0.1 }
static core::Real const	protocols::hbnet::SC_RMSD_CUTOFF = { 0.5 }

Detailed Description

base class HBNet; to detect and design h-bond networks

Author

Scott Boyken (sboyk.nosp@m.en@g.nosp@m.mail..nosp@m.com)