PlaceUtils.hh File Reference

#include <core/pose/Pose.fwd.hh>
#include <core/types.hh>
#include <core/scoring/func/HarmonicFunc.fwd.hh>
#include <core/scoring/constraints/Constraint.fwd.hh>
#include <core/conformation/Residue.fwd.hh>
#include <basic/datacache/DataMap.fwd.hh>
#include <core/pack/task/TaskFactory.fwd.hh>
#include <utility/tag/Tag.fwd.hh>
#include <core/scoring/ScoreFunction.fwd.hh>
#include <protocols/hotspot_hashing/HotspotStub.fwd.hh>
#include <protocols/hotspot_hashing/HotspotStubSet.fwd.hh>
#include <numeric/xyzVector.fwd.hh>
#include <utility/tag/XMLSchemaGeneration.fwd.hh>
#include <utility/vector1.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::protein_interface_design
	protocols::protein_interface_design::movers

Functions
bool	protocols::protein_interface_design::movers::test_res_res_aln (core::conformation::Residue const &res1, core::conformation::Residue const &res2, core::Real &C_N_angle, core::Real &CB_CA_angle)
core::scoring::constraints::ConstraintCOPs	protocols::protein_interface_design::movers::add_coordinate_constraints (pose::Pose &pose, core::conformation::Residue const &source, core::Size const host_chain, core::Size const resnum, core::Real const coord_sdev, core::scoring::func::HarmonicFuncOP &coord_cst_func)
void	protocols::protein_interface_design::movers::generate_taskfactory_and_add_task_awareness (utility::tag::TagCOP tag, basic::datacache::DataMap &data, core::pack::task::TaskFactoryOP &task_factory)
std::string	protocols::protein_interface_design::movers::nearest_atom_for_constraint (core::conformation::Residue const &residue)
core::Size	protocols::protein_interface_design::movers::find_nearest_residue_to_coord (core::pose::Pose const &pose, numeric::xyzVector< core::Real > const &coord, core::Size const host_chain)
	find the nearest residue to a coordinate More...
utility::vector1< std::pair< protocols::hotspot_hashing::HotspotStubSetOP, std::pair< protocols::hotspot_hashing::HotspotStubOP, core::Size > > >	protocols::protein_interface_design::movers::parse_stub_sets (utility::tag::TagCOP tag, basic::datacache::DataMap data)
	a utility function for parsing stubset information from a tag You will need to call finalize_stub_sets() with the reference pose prior to using them. More...
void	protocols::protein_interface_design::movers::finalize_stub_set (protocols::hotspot_hashing::HotspotStubSetOP stubset, core::pose::Pose const &pose, core::Size const host_chain)
	Update a stubset with the reference pose information. More...
void	protocols::protein_interface_design::movers::finalize_stub_sets (utility::vector1< std::pair< protocols::hotspot_hashing::HotspotStubSetOP, std::pair< protocols::hotspot_hashing::HotspotStubOP, core::Size > > > &stubsets, core::pose::Pose const &refpose, core::Size const host_chain)
	Update the stubsets created with parse_stub_sets with the reference pose information. More...
void	protocols::protein_interface_design::movers::add_subelement_for_parse_stub_sets (utility::tag::XMLSchemaSimpleSubelementList &ssl, utility::tag::XMLSchemaDefinition &xsd)
core::scoring::ScoreFunctionOP	protocols::protein_interface_design::movers::make_stub_scorefxn ()