protocols::parser Namespace Reference

Classes
class	BluePrint
class	ConstraintGeneratorLoader
	A class for loading arbitrary data into the XML parser's basic::datacache::DataMap. More...
class	ConstraintGeneratorLoaderCreator
class	DatabaseSessionLoader
	A class for loading arbitrary data into the XML parser's basic::datacache::DataMap. More...
class	DatabaseSessionLoaderCreator
class	DataLoader
	A class for loading arbitrary data into the XML parser's basic::datacache::DataMap. More...
class	DataLoaderCreator
	A class for creating new instances of DataLoaders for use in the XML Parser. More...
class	DataLoaderFactory
	A factory for creating DataLoaders, which are able to load arbitrary data into the basic::datacache::DataMap used in the XML-based parser. This factory supports the load-time registration scheme allowing DataLoaders to be defined in libraries outside of protocols.lib. More...
class	DataLoaderRegistrator
	This templated class will register an instance of an DataLoaderCreator (class T) with the DataLoaderFactory. It will ensure that no DataLoaderCreator is registered twice, and, centralizes this registration logic so that thread safety issues can be handled in one place. More...
class	FragmentReader
class	FragSetLoader
	A class for loading arbitrary data into the XML parser's basic::datacache::DataMap. More...
class	JumpSelectorLoader
	A class for loading arbitrary data into the XML parser's basic::datacache::DataMap. More...
class	JumpSelectorLoaderCreator
class	MonteCarloLoader
	The MonteCarloLoader will create named MonteCarlo objects and load them into the basic::datacache::DataMap. More...
class	MoveMapFactoryLoader
	A class for loading arbitrary data into the XML parser's basic::datacache::DataMap. More...
class	MoveMapFactoryLoaderCreator
class	PackerPaletteLoader
	A class for loading arbitrary data into the XML parser's basic::datacache::DataMap. More...
class	PackerPaletteLoaderCreator
class	ResidueSelectorLoader
	A class for loading arbitrary data into the XML parser's basic::datacache::DataMap. More...
class	ResidueSelectorLoaderCreator
class	ResLvlTaskOperationLoader
	A class for loading arbitrary data into the XML parser's basic::datacache::DataMap. More...
class	ScoreFunctionLoader
	A class for loading arbitrary data into the XML parser's basic::datacache::DataMap. More...
class	SimpleMetricLoader
	A class for loading arbitrary data into the XML parser's basic::datacache::DataMap. More...
class	SimpleMetricLoaderCreator
class	ScoreFunctionLoaderCreator
class	TaskOperationLoaderCreator
class	ResLvlTaskOperationLoaderCreator
class	FragSetLoaderCreator
class	MonteCarloLoaderCreator
class	TaskOperationLoader
	A class for loading arbitrary data into the XML parser's basic::datacache::DataMap. More...

Typedefs
typedef utility::pointer::shared_ptr< BluePrint >	BluePrintOP
typedef utility::pointer::shared_ptr< BluePrint const >	BluePrintCOP
typedef utility::pointer::shared_ptr< DataLoader >	DataLoaderOP
typedef utility::pointer::shared_ptr< DataLoader const >	DataLoaderCOP
typedef utility::pointer::shared_ptr< DataLoaderCreator >	DataLoaderCreatorOP
typedef utility::pointer::shared_ptr< DataLoaderCreator const >	DataLoaderCreatorCOP
typedef utility::pointer::shared_ptr< FragmentReader >	FragmentReaderOP

Functions
static basic::Tracer	TR ("protocols.jd2.parser.ConstraintGeneratorLoader")
static basic::Tracer	TR ("protocols.jd2.parser.DatabaseSessionLoader")
static basic::Tracer	TR ("protocols.jd2.parser.JumpSelectorLoader")
static basic::Tracer	TR ("protocols.jd2.parser.MonteCarloLoader")
static basic::Tracer	TR ("protocols.jd2.parser.MoveMapFactoryLoader")
static basic::Tracer	TR ("protocols.parser.PackerPaletteLoader")
static basic::Tracer	TR ("protocols.jd2.parser.ResidueSelectorLoader")
static basic::Tracer	TR ("protocols.jd2.parser.ResLvlTaskOperationLoader")
static basic::Tracer	TR ("protocols.jd2.parser.ScoreFunctionLoader")
std::string	score_function_subtag_complex_type_namer (std::string const &element_name)
std::string	score_function_subtag_group ()
std::string	score_function_tag_group ()
static basic::Tracer	TR ("protocols.parser.SimpleMetricLoader")
static basic::Tracer	TR ("protocols.jd2.parser.TaskOperationLoader")

Typedef Documentation

BluePrintCOP

typedef utility::pointer::shared_ptr< BluePrint const > protocols::parser::BluePrintCOP

BluePrintOP

typedef utility::pointer::shared_ptr< BluePrint > protocols::parser::BluePrintOP

DataLoaderCOP

typedef utility::pointer::shared_ptr< DataLoader const > protocols::parser::DataLoaderCOP

DataLoaderCreatorCOP

typedef utility::pointer::shared_ptr< DataLoaderCreator const > protocols::parser::DataLoaderCreatorCOP

DataLoaderCreatorOP

typedef utility::pointer::shared_ptr< DataLoaderCreator > protocols::parser::DataLoaderCreatorOP

DataLoaderOP

typedef utility::pointer::shared_ptr< DataLoader > protocols::parser::DataLoaderOP

FragmentReaderOP

typedef utility::pointer::shared_ptr< FragmentReader > protocols::parser::FragmentReaderOP

Function Documentation

score_function_subtag_complex_type_namer()

std::string protocols::parser::score_function_subtag_complex_type_namer

(

std::string const &

element_name

)

score_function_subtag_group()

std::string protocols::parser::score_function_subtag_group

(

)

score_function_tag_group()

std::string protocols::parser::score_function_tag_group

(

)

TR() [1/11]

static basic::Tracer protocols::parser::TR ( "protocols.jd2.parser.ConstraintGeneratorLoader"  )

static

Referenced by protocols::parser::FragmentReader::apply(), protocols::parser::BluePrint::BluePrint(), protocols::parser::ScoreFunctionLoader::create_scorefxn_from_tag(), protocols::parser::ConstraintGeneratorLoader::load_data(), protocols::parser::FragSetLoader::load_data(), protocols::parser::JumpSelectorLoader::load_data(), protocols::parser::MonteCarloLoader::load_data(), protocols::parser::MoveMapFactoryLoader::load_data(), protocols::parser::PackerPaletteLoader::load_data(), protocols::parser::ResidueSelectorLoader::load_data(), protocols::parser::ResLvlTaskOperationLoader::load_data(), protocols::parser::SimpleMetricLoader::load_data(), protocols::parser::TaskOperationLoader::load_data(), protocols::parser::FragmentReader::parse_tag(), protocols::parser::BluePrint::read_blueprint(), protocols::parser::BluePrint::read_blueprint_stream(), and protocols::parser::BluePrint::set_movemap().

TR() [2/11]

static basic::Tracer protocols::parser::TR ( "protocols.jd2.parser.DatabaseSessionLoader"  )

static

TR() [3/11]

static basic::Tracer protocols::parser::TR ( "protocols.jd2.parser.JumpSelectorLoader"  )

static

TR() [4/11]

static basic::Tracer protocols::parser::TR ( "protocols.jd2.parser.MonteCarloLoader"  )

static

TR() [5/11]

static basic::Tracer protocols::parser::TR ( "protocols.jd2.parser.MoveMapFactoryLoader"  )

static

TR() [6/11]

static basic::Tracer protocols::parser::TR ( "protocols.jd2.parser.ResidueSelectorLoader"  )

static

TR() [7/11]

static basic::Tracer protocols::parser::TR ( "protocols.jd2.parser.ResLvlTaskOperationLoader"  )

static

TR() [8/11]

static basic::Tracer protocols::parser::TR ( "protocols.jd2.parser.ScoreFunctionLoader"  )

static

TR() [9/11]

static basic::Tracer protocols::parser::TR ( "protocols.jd2.parser.TaskOperationLoader"  )

static

TR() [10/11]

static basic::Tracer protocols::parser::TR ( "protocols.parser.PackerPaletteLoader"  )

static

TR() [11/11]

static basic::Tracer protocols::parser::TR ( "protocols.parser.SimpleMetricLoader"  )

static