protocols::ncbb::oop Namespace Reference

Classes
class	OopCreatorMover
class	OopCreatorMoverCreator
class	OopDockDesignProtocol
class	OopDockDesignProtocolCreator

Typedefs
typedef utility::pointer::shared_ptr< OopCreatorMover >	OopCreatorMoverOP
typedef utility::pointer::shared_ptr< OopCreatorMover const >	OopCreatorMoverCOP
typedef utility::pointer::shared_ptr< OopCreatorMoverCreator >	OopCreatorMoverCreatorOP
typedef utility::pointer::shared_ptr< OopCreatorMoverCreator const >	OopCreatorMoverCreatorCOP
typedef utility::pointer::shared_ptr< OopDockDesignProtocol >	OopDockDesignProtocolOP
typedef utility::pointer::shared_ptr< OopDockDesignProtocol const >	OopDockDesignProtocolCOP
typedef utility::pointer::shared_ptr< OopDockDesignProtocolCreator >	OopDockDesignProtocolCreatorOP
typedef utility::pointer::shared_ptr< OopDockDesignProtocolCreator const >	OopDockDesignProtocolCreatorCOP

Functions
numeric::xyzVector< Real >	pep_COM (core::pose::Pose const &pose, core::Size pep_start, core::Size pep_end)

Typedef Documentation

OopCreatorMoverCOP

typedef utility::pointer::shared_ptr< OopCreatorMover const > protocols::ncbb::oop::OopCreatorMoverCOP

OopCreatorMoverCreatorCOP

typedef utility::pointer::shared_ptr< OopCreatorMoverCreator const > protocols::ncbb::oop::OopCreatorMoverCreatorCOP

OopCreatorMoverCreatorOP

typedef utility::pointer::shared_ptr< OopCreatorMoverCreator > protocols::ncbb::oop::OopCreatorMoverCreatorOP

OopCreatorMoverOP

typedef utility::pointer::shared_ptr< OopCreatorMover > protocols::ncbb::oop::OopCreatorMoverOP

OopDockDesignProtocolCOP

typedef utility::pointer::shared_ptr< OopDockDesignProtocol const > protocols::ncbb::oop::OopDockDesignProtocolCOP

OopDockDesignProtocolCreatorCOP

typedef utility::pointer::shared_ptr< OopDockDesignProtocolCreator const > protocols::ncbb::oop::OopDockDesignProtocolCreatorCOP

OopDockDesignProtocolCreatorOP

typedef utility::pointer::shared_ptr< OopDockDesignProtocolCreator > protocols::ncbb::oop::OopDockDesignProtocolCreatorOP

OopDockDesignProtocolOP

typedef utility::pointer::shared_ptr< OopDockDesignProtocol > protocols::ncbb::oop::OopDockDesignProtocolOP

Function Documentation

pep_COM()

numeric::xyzVector< Real > protocols::ncbb::oop::pep_COM	(	core::pose::Pose const &	pose,
		core::Size	pep_start,
		core::Size	pep_end
	)

References core::conformation::Residue::aa(), core::chemical::aa_vrt, core::conformation::Residue::atom(), core::conformation::Residue::nheavyatoms(), core::pose::Pose::residue(), and core::conformation::Atom::xyz().

Referenced by protocols::ncbb::oop::OopDockDesignProtocol::apply().