ResiduePairJump.hh File Reference

a class to create jump transform from a pair of residues More...

#include <protocols/jumping/ResiduePairJump.fwd.hh>
#include <core/types.hh>
#include <core/chemical/ResidueType.fwd.hh>
#include <core/fragment/Frame.fwd.hh>
#include <core/pose/Pose.fwd.hh>
#include <core/kinematics/Jump.hh>
#include <utility/VirtualBase.hh>
#include <string>
#include <map>
#include <core/pack/rotamer_set/RotamerSet.fwd.hh>
#include <utility/vector1.hh>

Classes
class	protocols::jumping::ResiduePairJumpSingle
	a single residue component of a ResiduePairJump class More...
class	protocols::jumping::ResiduePairJump

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::jumping

Enumerations
enum	protocols::jumping::cstType {   protocols::jumping::disAB = 1 , protocols::jumping::angleA , protocols::jumping::angleB , protocols::jumping::dihedralA ,   protocols::jumping::dihedralAB , protocols::jumping::dihedralB , protocols::jumping::num_cstType = dihedralB }
enum	protocols::jumping::dofType { protocols::jumping::rot1 = 1 , protocols::jumping::rot2 , protocols::jumping::cstJump , protocols::jumping::num_dofType = cstJump }

Detailed Description

a class to create jump transform from a pair of residues

This class is to create possible jump transforms between a pair of residues when their sidechains are locked in certain geometry constraints. It starts from the predefined constraints and takes backbone-independent rotamer conformation into account and reversely generate their backbone positions. Then a jump transform is measured.

Author

Chu Wang