jump.cc File Reference

Utility functions for calculating jumps by knowing desired atom positions. More...

#include <core/kinematics/inverse/jump.hh>
#include <core/kinematics/inverse/util.hh>
#include <core/kinematics/inverse/AlignmentAtom.hh>
#include <basic/Tracer.hh>
#include <numeric/HomogeneousTransform.hh>
#include <core/kinematics/Jump.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/kinematics/Edge.hh>
#include <utility/excn/Exceptions.hh>

Namespaces
	core
	A class for reading in the atom type properties.
	core::kinematics
	core::kinematics::inverse

Typedefs
using	core::kinematics::inverse::XYZ = numeric::xyzVector< core::Real >

Functions
static basic::Tracer	core::kinematics::inverse::TR ("core.kinematics.inverse.jump")
Jump	core::kinematics::inverse::calculate_new_jump (conformation::Conformation const &conformation, core::Size const jump_id, AlignmentAtomArray const &atoms)
	Update a desired jump in the conformation to place the atoms in the AlignmentAtomArray to the desired position. More...

Detailed Description

Utility functions for calculating jumps by knowing desired atom positions.

Author

Jack Maguire