Directory dependency graph for kinematics:
Directories | |
| directory | inverse |
| directory | jacobian |
| directory | tree |
Files | |
| file | AtomPointer.fwd.hh |
| kinematics::AtomPointer2D forward declarations header | |
| file | AtomPointer.hh |
| Map from Atom identifiers to Atom pointers. | |
| file | AtomTree.cc |
| Atom tree class. | |
| file | AtomTree.fwd.hh |
| kinematics::AtomTree forward declarations header | |
| file | AtomTree.hh |
| Atom tree class. | |
| file | AtomWithDOFChange.cc |
| file | AtomWithDOFChange.fwd.hh |
| Data structure for output-sensitie refold data class forward declaration. | |
| file | AtomWithDOFChange.hh |
| Data structure for output-sensitie refold data class declaration. | |
| file | constants.cc |
| file | constants.hh |
| file | DomainMap.fwd.hh |
| file | DomainMap.hh |
| file | Edge.cc |
| Fold tree edge class. | |
| file | Edge.fwd.hh |
| Kinematics Edge forward declarations header. | |
| file | Edge.hh |
| Fold tree edge class. | |
| file | Exceptions.hh |
| Fold tree class. | |
| file | FoldTree.cc |
| Fold tree class. | |
| file | FoldTree.fwd.hh |
| kinematics::FoldTree forward declarations header | |
| file | FoldTree.hh |
| Fold tree class. | |
| file | Jump.cc |
| Kinematics Jump class. | |
| file | Jump.fwd.hh |
| Kinematics Jump forward declarations header. | |
| file | Jump.hh |
| Kinematics Jump class. | |
| file | MinimizerMapBase.cc |
| Kinematics. | |
| file | MinimizerMapBase.fwd.hh |
| Forward declaration of the minimizer-map base class for communicating between an AtomTree and the class that will use the AtomTree to perform some gradient-based minimization. | |
| file | MinimizerMapBase.hh |
| Deriviative classes from this base class will implement three virtual functions allowing the AtomTree to communicate with an outside Minimizer about how the degrees of freedom in the AtomTree should be minimized. | |
| file | MoveMap.cc |
| Method definitions for the MoveMap. | |
| file | MoveMap.fwd.hh |
| Kinematics MoveMap forward declarations header. | |
| file | MoveMap.hh |
| Declarations for the MoveMap class. | |
| file | ResidueCoordinateChangeList.cc |
| file | ResidueCoordinateChangeList.fwd.hh |
| AtomTree/Conformation communication vector class forward declaration. | |
| file | ResidueCoordinateChangeList.hh |
| file | RT.cc |
| Rotation + translation class. | |
| file | RT.fwd.hh |
| Kinematics RT forward declarations header. | |
| file | RT.hh |
| Rotation + translation class. | |
| file | ShortestPathInFoldTree.cc |
| helper class to FoldTree: allows to measure distance in fold-trees | |
| file | ShortestPathInFoldTree.fwd.hh |
| kinematics::ShortestPathInFoldTree forward declarations header | |
| file | ShortestPathInFoldTree.hh |
| Fold tree helper class. | |
| file | Stub.cc |
| Stub class. | |
| file | Stub.fwd.hh |
| Kinematics Stub forward declarations header. | |
| file | Stub.hh |
| Stub class. | |
| file | types.hh |
| core::kinematics package type declarations | |
| file | util.cc |
| Kinematics utility functions. | |
| file | util.hh |
| Kinematics utility functions. | |
