protocols::cryst Namespace Reference

Classes
struct	CheshireCell
	A struct used by spacegroup.cc and its helper functions. More...
class	ReportGradientsMover
class	SetCrystWeightMover
class	RecomputeDensityMapMover
class	LoadDensityMapMover
	This class loads a density map into global data. Each apply will regenerate this data and force a reload of the data by default. More...
class	FitBfactorsMover
class	UpdateSolventMover
class	TagPoseWithRefinementStatsMover
class	SetRefinementOptionsMover
class	ReportGradientsMoverCreator
class	SetCrystWeightMoverCreator
class	RecomputeDensityMapMoverCreator
class	LoadDensityMapMoverCreator
class	FitBfactorsMoverCreator
class	UpdateSolventMoverCreator
class	TagPoseWithRefinementStatsMoverCreator
class	SetRefinementOptionsMoverCreator
class	UpdateCrystInfo
class	CrystRMS
class	DockLatticeMover
class	MakeLatticeMover
class	UpdateCrystInfoCreator
class	CrystRMSCreator
class	DockLatticeMoverCreator
class	MakeLatticeMoverCreator
class	MakeLayerMoverCreator
class	Spacegroup
class	MakeLayerMover
class	WallpaperGroup

Enumerations
enum	SpacegroupSetting {   TRICLINIC , MONOCLINIC , ORTHORHOMBIC , TETRAGONAL ,   HEXAGONAL , CUBIC , NOSETTING }
enum	WallpaperGroupSetting {   wgMONOCLINIC , wgTETRAGONAL , wgHEXAGONAL , wgCUBIC ,   wgNOSETTING }

Functions
static basic::Tracer	TR ("protocols.cryst.cryst_movers")
std::string	SetCrystWeightMover_subelement_ct_name (std::string const &name)
void	get_corresponding_CAs (core::pose::Pose const &model, core::pose::Pose const &native, core::sequence::SequenceAlignment const &aln, ObjexxFCL::FArray2D< core::Real > &p1a, ObjexxFCL::FArray2D< core::Real > &p2a)
core::Size	get_nres_asu (core::pose::Pose const &pose)
core::Real	crystRMSfast (core::pose::Pose &pose_native, core::pose::Pose &pose_decoy)
core::Real	crystRMS (core::pose::Pose &pose_native, core::pose::Pose &pose_decoy, bool allatom, int native_cdist, int decoy_cdist)
static basic::Tracer	TR ("protocols.cryst.refinable_lattice")
core::Real	getMW (core::pose::Pose const &pose)
core::Real	getVolume (core::Real A, core::Real B, core::Real C, core::Real alpha, core::Real beta, core::Real gamma)
static basic::Tracer	TSG ("spacegroup")
core::Real	absfpart (core::Real x)
core::Size	denom (core::Real x)
void	get_symmops_P1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P121 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P1211 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_C121 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P1m1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P1c1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_C1m1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_C1c1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P12slashm1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P121slashm1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_C12slashm1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P12slashc1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P121slashc1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P121slashn1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_C12slashc1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P222 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P2221 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P21212 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P212121 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_C2221 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_C222 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_F222 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_I222 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_I212121 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pmm2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pmc21 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pcc2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pma2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pca21 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pnc2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pmn21 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pba2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pna21 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pnn2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Cmm2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Cmc21 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Ccc2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Amm2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Abm2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Ama2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Aba2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Fmm2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Fdd2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Imm2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Iba2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Ima2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pmmm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pnnn__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pccm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pban__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pmma (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pnna (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pmna (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pcca (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pbam (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pccn (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pbcm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pnnm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pmmn__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pbcn (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pbca (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pnma (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Cmcm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Cmca (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Cmmm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Cccm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Cmma (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Ccca__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Fmmm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Fddd__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Immm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Ibam (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Ibca (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Imma (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P41 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P42 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P43 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_I4 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_I41 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus4 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Iminus4 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4slashm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P42slashm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4slashn__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P42slashn__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_I4slashm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_I41slasha__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P422 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4212 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4122 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P41212 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4222 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P42212 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4322 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P43212 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_I422 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_I4122 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4mm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4bm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P42cm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P42nm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4cc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4nc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P42mc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P42bc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_I4mm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_I4cm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_I41md (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_I41cd (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus42m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus42c (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus421m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus421c (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus4m2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus4c2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus4b2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus4n2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Iminus4m2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Iminus4c2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Iminus42m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Iminus42d (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4slashmmm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4slashmcc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4slashnbm__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4slashnnc__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4slashmbm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4slashmnc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4slashnmm__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4slashncc__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P42slashmmc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P42slashmcm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P42slashnbc__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P42slashnnm__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P42slashmbc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P42slashmnm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P42slashnmc__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P42slashncm__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_I4slashmmm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_I4slashmcm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_I41slashamd__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_I41slashacd__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P3 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P31 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P32 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_R3__H (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus3 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Rminus3__H (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P312 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P321 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P3112 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P3121 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P3212 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P3221 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_R32__H (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P3m1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P31m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P3c1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P31c (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_R3m__H (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_R3c__H (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus31m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus31c (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus3m1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus3c1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Rminus3m__H (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Rminus3c__H (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P6 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P61 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P65 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P62 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P64 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P63 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus6 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P6slashm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P63slashm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P622 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P6122 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P6522 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P6222 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P6422 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P6322 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P6mm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P6cc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P63cm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P63mc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus6m2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus6c2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus62m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus62c (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P6slashmmm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P6slashmcc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P63slashmcm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P63slashmmc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P23 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_F23 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_I23 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P213 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_I213 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pmminus3 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pnminus3__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Fmminus3 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Fdminus3__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Imminus3 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Paminus3 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Iaminus3 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P432 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4232 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_F432 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_F4132 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_I432 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4332 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_P4132 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_I4132 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus43m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Fminus43m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Iminus43m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pminus43n (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Fminus43c (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Iminus43d (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pmminus3m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pnminus3n__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pmminus3n (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Pnminus3m__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Fmminus3m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Fmminus3c (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Fdminus3m__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Fdminus3c__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Imminus3m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_Iaminus3d (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
void	get_symmops_B11m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
static basic::Tracer	TR ("protocols.cryst.refinable_lattice")
int	pos_mod (int x, int y)
core::Real	pos_mod (core::Real x, core::Real y)
int	min_mod (int x, int y)
core::Real	min_mod (core::Real x, core::Real y)
static basic::Tracer	TSW ("WallpaperGroup")

Enumeration Type Documentation

SpacegroupSetting

enum protocols::cryst::SpacegroupSetting

Enumerator
TRICLINIC
MONOCLINIC
ORTHORHOMBIC
TETRAGONAL
HEXAGONAL
CUBIC
NOSETTING

WallpaperGroupSetting

enum protocols::cryst::WallpaperGroupSetting

Enumerator
wgMONOCLINIC
wgTETRAGONAL
wgHEXAGONAL
wgCUBIC
wgNOSETTING

Function Documentation

absfpart()

core::Real protocols::cryst::absfpart ( core::Real  x )

inline

Referenced by denom().

crystRMS()

core::Real protocols::cryst::crystRMS	(	core::pose::Pose &	pose_native,
		core::pose::Pose &	pose_decoy,
		bool	allatom,
		int	native_cdist,
		int	decoy_cdist
	)

References protocols::cryst::MakeLatticeMover::apply(), core::conformation::Residue::atom(), core::pose::Pose::conformation(), protocols::cryst::MakeLatticeMover::contact_dist(), core::conformation::Residue::is_protein(), core::pose::symmetry::is_symmetric(), core::conformation::Residue::nheavyatoms(), core::pose::Pose::residue(), core::scoring::rms, and core::conformation::Atom::xyz().

Referenced by protocols::cryst::CrystRMS::apply(), and protocols::cryst::DockLatticeMover::apply().

crystRMSfast()

core::Real protocols::cryst::crystRMSfast	(	core::pose::Pose &	pose_native,
		core::pose::Pose &	pose_decoy
	)

References core::io::CrystInfo::A(), core::io::CrystInfo::alpha(), core::conformation::Residue::atom(), core::io::CrystInfo::B(), core::io::CrystInfo::beta(), core::io::CrystInfo::C(), protocols::cryst::Spacegroup::c2f(), core::kinematics::distance(), protocols::cryst::Spacegroup::f2c(), core::io::CrystInfo::gamma(), get_nres_asu(), core::kinematics::RT::get_rotation(), core::kinematics::RT::get_translation(), core::conformation::Residue::is_protein(), protocols::mean_field::max(), protocols::cryst::Spacegroup::nsymmops(), core::pose::Pose::pdb_info(), core::pose::Pose::residue(), protocols::cryst::Spacegroup::set_parameters(), protocols::cryst::Spacegroup::set_spacegroup(), core::io::CrystInfo::spacegroup(), protocols::cryst::Spacegroup::symmop(), and core::conformation::Residue::xyz().

denom()

core::Size protocols::cryst::denom ( core::Real  x )

inline

References absfpart().

Referenced by protocols::dna::DnaInterfacePacker::calculate_specificity(), core::optimization::LineMinimizationAlgorithm::cubic_interpolation(), core::membrane::distance_from_line2D(), core::scoring::GenBornPotential::eval_atom_derivative(), protocols::multistate_design::PartitionAggregateFunction::evaluate(), core::conformation::membrane::MembraneGeometry::f_franklin_gradient(), core::scoring::TMscore::get_ali_params(), protocols::cryst::WallpaperGroup::get_nsubdivisions(), protocols::cryst::Spacegroup::get_nsubdivisions(), core::scoring::GenBornPotential::get_res_res_elecE(), core::scoring::electron_density::ElectronDensity::initializeSymmOps(), core::scoring::electron_density_atomwise::ElectronDensityAtomwise::initializeSymmOps(), protocols::electron_density::DensitySymmInfo::resolve_symm_axes(), protocols::mpi_refinement::MPI_Refinement::send_sortedpick_library_structs(), core::energy_methods::Fa_MbsolvEnergy::solv_piece(), and core::energy_methods::FaMPSolvEnergy::solv_piece().

get_corresponding_CAs()

void protocols::cryst::get_corresponding_CAs	(	core::pose::Pose const &	model,
		core::pose::Pose const &	native,
		core::sequence::SequenceAlignment const &	aln,
		ObjexxFCL::FArray2D< core::Real > &	p1a,
		ObjexxFCL::FArray2D< core::Real > &	p2a
	)

References core::conformation::Residue::is_protein(), core::pose::Pose::residue(), core::sequence::SequenceAlignment::sequence_mapping(), core::pose::Pose::size(), and core::conformation::Residue::xyz().

Referenced by protocols::cryst::TagPoseWithRefinementStatsMover::apply().

get_nres_asu()

core::Size protocols::cryst::get_nres_asu

(

core::pose::Pose const &

pose

)

References core::conformation::Residue::aa(), core::chemical::aa_vrt, core::pose::Pose::conformation(), core::conformation::Residue::is_protein(), core::pose::symmetry::is_symmetric(), core::pose::Pose::residue(), and core::pose::Pose::size().

Referenced by crystRMSfast().

get_symmops_Aba2()

void protocols::cryst::get_symmops_Aba2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Abm2()

void protocols::cryst::get_symmops_Abm2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Ama2()

void protocols::cryst::get_symmops_Ama2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Amm2()

void protocols::cryst::get_symmops_Amm2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_B11m()

void protocols::cryst::get_symmops_B11m	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_C121()

void protocols::cryst::get_symmops_C121	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_C12slashc1()

void protocols::cryst::get_symmops_C12slashc1	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_C12slashm1()

void protocols::cryst::get_symmops_C12slashm1	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_C1c1()

void protocols::cryst::get_symmops_C1c1	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_C1m1()

void protocols::cryst::get_symmops_C1m1	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_C222()

void protocols::cryst::get_symmops_C222	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_C2221()

void protocols::cryst::get_symmops_C2221	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Ccc2()

void protocols::cryst::get_symmops_Ccc2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Ccca__2()

void protocols::cryst::get_symmops_Ccca__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Cccm()

void protocols::cryst::get_symmops_Cccm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Cmc21()

void protocols::cryst::get_symmops_Cmc21	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Cmca()

void protocols::cryst::get_symmops_Cmca	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Cmcm()

void protocols::cryst::get_symmops_Cmcm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Cmm2()

void protocols::cryst::get_symmops_Cmm2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Cmma()

void protocols::cryst::get_symmops_Cmma	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Cmmm()

void protocols::cryst::get_symmops_Cmmm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_F222()

void protocols::cryst::get_symmops_F222	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_F23()

void protocols::cryst::get_symmops_F23	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_F4132()

void protocols::cryst::get_symmops_F4132	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_F432()

void protocols::cryst::get_symmops_F432	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Fdd2()

void protocols::cryst::get_symmops_Fdd2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Fddd__2()

void protocols::cryst::get_symmops_Fddd__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Fdminus3__2()

void protocols::cryst::get_symmops_Fdminus3__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Fdminus3c__2()

void protocols::cryst::get_symmops_Fdminus3c__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Fdminus3m__2()

void protocols::cryst::get_symmops_Fdminus3m__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Fminus43c()

void protocols::cryst::get_symmops_Fminus43c	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Fminus43m()

void protocols::cryst::get_symmops_Fminus43m	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Fmm2()

void protocols::cryst::get_symmops_Fmm2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Fmminus3()

void protocols::cryst::get_symmops_Fmminus3	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Fmminus3c()

void protocols::cryst::get_symmops_Fmminus3c	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Fmminus3m()

void protocols::cryst::get_symmops_Fmminus3m	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Fmmm()

void protocols::cryst::get_symmops_Fmmm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_I212121()

void protocols::cryst::get_symmops_I212121	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_I213()

void protocols::cryst::get_symmops_I213	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_I222()

void protocols::cryst::get_symmops_I222	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_I23()

void protocols::cryst::get_symmops_I23	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_I4()

void protocols::cryst::get_symmops_I4	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_I41()

void protocols::cryst::get_symmops_I41	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_I4122()

void protocols::cryst::get_symmops_I4122	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_I4132()

void protocols::cryst::get_symmops_I4132	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_I41cd()

void protocols::cryst::get_symmops_I41cd	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_I41md()

void protocols::cryst::get_symmops_I41md	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_I41slasha__2()

void protocols::cryst::get_symmops_I41slasha__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_I41slashacd__2()

void protocols::cryst::get_symmops_I41slashacd__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_I41slashamd__2()

void protocols::cryst::get_symmops_I41slashamd__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_I422()

void protocols::cryst::get_symmops_I422	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_I432()

void protocols::cryst::get_symmops_I432	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_I4cm()

void protocols::cryst::get_symmops_I4cm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_I4mm()

void protocols::cryst::get_symmops_I4mm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_I4slashm()

void protocols::cryst::get_symmops_I4slashm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_I4slashmcm()

void protocols::cryst::get_symmops_I4slashmcm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_I4slashmmm()

void protocols::cryst::get_symmops_I4slashmmm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Iaminus3()

void protocols::cryst::get_symmops_Iaminus3	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Iaminus3d()

void protocols::cryst::get_symmops_Iaminus3d	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Iba2()

void protocols::cryst::get_symmops_Iba2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Ibam()

void protocols::cryst::get_symmops_Ibam	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Ibca()

void protocols::cryst::get_symmops_Ibca	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Ima2()

void protocols::cryst::get_symmops_Ima2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Iminus4()

void protocols::cryst::get_symmops_Iminus4	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Iminus42d()

void protocols::cryst::get_symmops_Iminus42d	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Iminus42m()

void protocols::cryst::get_symmops_Iminus42m	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Iminus43d()

void protocols::cryst::get_symmops_Iminus43d	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Iminus43m()

void protocols::cryst::get_symmops_Iminus43m	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Iminus4c2()

void protocols::cryst::get_symmops_Iminus4c2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Iminus4m2()

void protocols::cryst::get_symmops_Iminus4m2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Imm2()

void protocols::cryst::get_symmops_Imm2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Imma()

void protocols::cryst::get_symmops_Imma	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Imminus3()

void protocols::cryst::get_symmops_Imminus3	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Imminus3m()

void protocols::cryst::get_symmops_Imminus3m	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Immm()

void protocols::cryst::get_symmops_Immm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P1()

void protocols::cryst::get_symmops_P1	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P121()

void protocols::cryst::get_symmops_P121	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P1211()

void protocols::cryst::get_symmops_P1211	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P121slashc1()

void protocols::cryst::get_symmops_P121slashc1	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P121slashm1()

void protocols::cryst::get_symmops_P121slashm1	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P121slashn1()

void protocols::cryst::get_symmops_P121slashn1	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P12slashc1()

void protocols::cryst::get_symmops_P12slashc1	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P12slashm1()

void protocols::cryst::get_symmops_P12slashm1	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P1c1()

void protocols::cryst::get_symmops_P1c1	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P1m1()

void protocols::cryst::get_symmops_P1m1	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P21212()

void protocols::cryst::get_symmops_P21212	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P212121()

void protocols::cryst::get_symmops_P212121	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P213()

void protocols::cryst::get_symmops_P213	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P222()

void protocols::cryst::get_symmops_P222	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P2221()

void protocols::cryst::get_symmops_P2221	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P23()

void protocols::cryst::get_symmops_P23	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P3()

void protocols::cryst::get_symmops_P3	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P31()

void protocols::cryst::get_symmops_P31	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P3112()

void protocols::cryst::get_symmops_P3112	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P312()

void protocols::cryst::get_symmops_P312	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P3121()

void protocols::cryst::get_symmops_P3121	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P31c()

void protocols::cryst::get_symmops_P31c	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P31m()

void protocols::cryst::get_symmops_P31m	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P32()

void protocols::cryst::get_symmops_P32	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P321()

void protocols::cryst::get_symmops_P321	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P3212()

void protocols::cryst::get_symmops_P3212	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P3221()

void protocols::cryst::get_symmops_P3221	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P3c1()

void protocols::cryst::get_symmops_P3c1	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P3m1()

void protocols::cryst::get_symmops_P3m1	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4()

void protocols::cryst::get_symmops_P4	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P41()

void protocols::cryst::get_symmops_P41	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P41212()

void protocols::cryst::get_symmops_P41212	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4122()

void protocols::cryst::get_symmops_P4122	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4132()

void protocols::cryst::get_symmops_P4132	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P42()

void protocols::cryst::get_symmops_P42	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4212()

void protocols::cryst::get_symmops_P4212	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P422()

void protocols::cryst::get_symmops_P422	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P42212()

void protocols::cryst::get_symmops_P42212	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4222()

void protocols::cryst::get_symmops_P4222	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4232()

void protocols::cryst::get_symmops_P4232	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P42bc()

void protocols::cryst::get_symmops_P42bc	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P42cm()

void protocols::cryst::get_symmops_P42cm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P42mc()

void protocols::cryst::get_symmops_P42mc	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P42nm()

void protocols::cryst::get_symmops_P42nm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P42slashm()

void protocols::cryst::get_symmops_P42slashm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P42slashmbc()

void protocols::cryst::get_symmops_P42slashmbc	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P42slashmcm()

void protocols::cryst::get_symmops_P42slashmcm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P42slashmmc()

void protocols::cryst::get_symmops_P42slashmmc	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P42slashmnm()

void protocols::cryst::get_symmops_P42slashmnm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P42slashn__2()

void protocols::cryst::get_symmops_P42slashn__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P42slashnbc__2()

void protocols::cryst::get_symmops_P42slashnbc__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P42slashncm__2()

void protocols::cryst::get_symmops_P42slashncm__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P42slashnmc__2()

void protocols::cryst::get_symmops_P42slashnmc__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P42slashnnm__2()

void protocols::cryst::get_symmops_P42slashnnm__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P43()

void protocols::cryst::get_symmops_P43	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P432()

void protocols::cryst::get_symmops_P432	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P43212()

void protocols::cryst::get_symmops_P43212	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4322()

void protocols::cryst::get_symmops_P4322	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4332()

void protocols::cryst::get_symmops_P4332	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4bm()

void protocols::cryst::get_symmops_P4bm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4cc()

void protocols::cryst::get_symmops_P4cc	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4mm()

void protocols::cryst::get_symmops_P4mm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4nc()

void protocols::cryst::get_symmops_P4nc	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4slashm()

void protocols::cryst::get_symmops_P4slashm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4slashmbm()

void protocols::cryst::get_symmops_P4slashmbm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4slashmcc()

void protocols::cryst::get_symmops_P4slashmcc	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4slashmmm()

void protocols::cryst::get_symmops_P4slashmmm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4slashmnc()

void protocols::cryst::get_symmops_P4slashmnc	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4slashn__2()

void protocols::cryst::get_symmops_P4slashn__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4slashnbm__2()

void protocols::cryst::get_symmops_P4slashnbm__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4slashncc__2()

void protocols::cryst::get_symmops_P4slashncc__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4slashnmm__2()

void protocols::cryst::get_symmops_P4slashnmm__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P4slashnnc__2()

void protocols::cryst::get_symmops_P4slashnnc__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P6()

void protocols::cryst::get_symmops_P6	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P61()

void protocols::cryst::get_symmops_P61	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P6122()

void protocols::cryst::get_symmops_P6122	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P62()

void protocols::cryst::get_symmops_P62	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P622()

void protocols::cryst::get_symmops_P622	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P6222()

void protocols::cryst::get_symmops_P6222	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P63()

void protocols::cryst::get_symmops_P63	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P6322()

void protocols::cryst::get_symmops_P6322	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P63cm()

void protocols::cryst::get_symmops_P63cm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P63mc()

void protocols::cryst::get_symmops_P63mc	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P63slashm()

void protocols::cryst::get_symmops_P63slashm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P63slashmcm()

void protocols::cryst::get_symmops_P63slashmcm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P63slashmmc()

void protocols::cryst::get_symmops_P63slashmmc	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P64()

void protocols::cryst::get_symmops_P64	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P6422()

void protocols::cryst::get_symmops_P6422	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P65()

void protocols::cryst::get_symmops_P65	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P6522()

void protocols::cryst::get_symmops_P6522	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P6cc()

void protocols::cryst::get_symmops_P6cc	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P6mm()

void protocols::cryst::get_symmops_P6mm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P6slashm()

void protocols::cryst::get_symmops_P6slashm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P6slashmcc()

void protocols::cryst::get_symmops_P6slashmcc	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_P6slashmmm()

void protocols::cryst::get_symmops_P6slashmmm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Paminus3()

void protocols::cryst::get_symmops_Paminus3	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pba2()

void protocols::cryst::get_symmops_Pba2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pbam()

void protocols::cryst::get_symmops_Pbam	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pban__2()

void protocols::cryst::get_symmops_Pban__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pbca()

void protocols::cryst::get_symmops_Pbca	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pbcm()

void protocols::cryst::get_symmops_Pbcm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pbcn()

void protocols::cryst::get_symmops_Pbcn	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pca21()

void protocols::cryst::get_symmops_Pca21	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pcc2()

void protocols::cryst::get_symmops_Pcc2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pcca()

void protocols::cryst::get_symmops_Pcca	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pccm()

void protocols::cryst::get_symmops_Pccm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pccn()

void protocols::cryst::get_symmops_Pccn	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pma2()

void protocols::cryst::get_symmops_Pma2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pmc21()

void protocols::cryst::get_symmops_Pmc21	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus1()

void protocols::cryst::get_symmops_Pminus1	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus3()

void protocols::cryst::get_symmops_Pminus3	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus31c()

void protocols::cryst::get_symmops_Pminus31c	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus31m()

void protocols::cryst::get_symmops_Pminus31m	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus3c1()

void protocols::cryst::get_symmops_Pminus3c1	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus3m1()

void protocols::cryst::get_symmops_Pminus3m1	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus4()

void protocols::cryst::get_symmops_Pminus4	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus421c()

void protocols::cryst::get_symmops_Pminus421c	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus421m()

void protocols::cryst::get_symmops_Pminus421m	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus42c()

void protocols::cryst::get_symmops_Pminus42c	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus42m()

void protocols::cryst::get_symmops_Pminus42m	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus43m()

void protocols::cryst::get_symmops_Pminus43m	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus43n()

void protocols::cryst::get_symmops_Pminus43n	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus4b2()

void protocols::cryst::get_symmops_Pminus4b2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus4c2()

void protocols::cryst::get_symmops_Pminus4c2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus4m2()

void protocols::cryst::get_symmops_Pminus4m2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus4n2()

void protocols::cryst::get_symmops_Pminus4n2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus6()

void protocols::cryst::get_symmops_Pminus6	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus62c()

void protocols::cryst::get_symmops_Pminus62c	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus62m()

void protocols::cryst::get_symmops_Pminus62m	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus6c2()

void protocols::cryst::get_symmops_Pminus6c2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pminus6m2()

void protocols::cryst::get_symmops_Pminus6m2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pmm2()

void protocols::cryst::get_symmops_Pmm2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pmma()

void protocols::cryst::get_symmops_Pmma	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pmminus3()

void protocols::cryst::get_symmops_Pmminus3	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pmminus3m()

void protocols::cryst::get_symmops_Pmminus3m	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pmminus3n()

void protocols::cryst::get_symmops_Pmminus3n	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pmmm()

void protocols::cryst::get_symmops_Pmmm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pmmn__2()

void protocols::cryst::get_symmops_Pmmn__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pmn21()

void protocols::cryst::get_symmops_Pmn21	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pmna()

void protocols::cryst::get_symmops_Pmna	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pna21()

void protocols::cryst::get_symmops_Pna21	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pnc2()

void protocols::cryst::get_symmops_Pnc2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pnma()

void protocols::cryst::get_symmops_Pnma	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pnminus3__2()

void protocols::cryst::get_symmops_Pnminus3__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pnminus3m__2()

void protocols::cryst::get_symmops_Pnminus3m__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pnminus3n__2()

void protocols::cryst::get_symmops_Pnminus3n__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pnn2()

void protocols::cryst::get_symmops_Pnn2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pnna()

void protocols::cryst::get_symmops_Pnna	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pnnm()

void protocols::cryst::get_symmops_Pnnm	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Pnnn__2()

void protocols::cryst::get_symmops_Pnnn__2	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_R32__H()

void protocols::cryst::get_symmops_R32__H	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_R3__H()

void protocols::cryst::get_symmops_R3__H	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_R3c__H()

void protocols::cryst::get_symmops_R3c__H	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_R3m__H()

void protocols::cryst::get_symmops_R3m__H	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Rminus3__H()

void protocols::cryst::get_symmops_Rminus3__H	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Rminus3c__H()

void protocols::cryst::get_symmops_Rminus3c__H	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

get_symmops_Rminus3m__H()

void protocols::cryst::get_symmops_Rminus3m__H	(	utility::vector1< core::kinematics::RT > &	rt_out,
		CheshireCell &	cc
	)

Referenced by protocols::cryst::Spacegroup::get_symmops().

getMW()

core::Real protocols::cryst::getMW

(

core::pose::Pose const &

pose

)

References core::conformation::Residue::atom(), core::chemical::ResidueTypeBase::atom_type_set(), core::conformation::Residue::natoms(), core::pose::Pose::residue(), core::pose::Pose::total_residue(), core::conformation::Residue::type(), and core::conformation::Atom::type().

Referenced by protocols::cryst::DockLatticeMover::initialize(), and protocols::cryst::DockLatticeMover::regenerate_lattice().

getVolume()

core::Real protocols::cryst::getVolume	(	core::Real	A,
		core::Real	B,
		core::Real	C,
		core::Real	alpha,
		core::Real	beta,
		core::Real	gamma
	)

References protocols::comparative_modeling::features::A, core::chemical::element::B, core::chemical::element::C, and DEG2RAD.

Referenced by protocols::cryst::DockLatticeMover::regenerate_lattice().

min_mod() [1/2]

core::Real protocols::cryst::min_mod ( core::Real  x, core::Real  y  )

inline

min_mod() [2/2]

int protocols::cryst::min_mod ( int  x, int  y  )

inline

Referenced by protocols::cryst::MakeLatticeMover::place_near_origin().

pos_mod() [1/2]

core::Real protocols::cryst::pos_mod ( core::Real  x, core::Real  y  )

inline

pos_mod() [2/2]

int protocols::cryst::pos_mod ( int  x, int  y  )

inline

Referenced by protocols::cryst::MakeLayerMover::place_near_origin().

SetCrystWeightMover_subelement_ct_name()

std::string protocols::cryst::SetCrystWeightMover_subelement_ct_name

(

std::string const &

name

)

Referenced by protocols::cryst::SetCrystWeightMover::provide_xml_schema().

TR() [1/3]

static basic::Tracer protocols::cryst::TR ( "protocols.cryst.cryst_movers"  )

static

Referenced by protocols::cryst::SetCrystWeightMover::apply(), protocols::cryst::TagPoseWithRefinementStatsMover::apply(), protocols::cryst::SetRefinementOptionsMover::apply(), protocols::cryst::CrystRMS::apply(), protocols::cryst::DockLatticeMover::apply(), protocols::cryst::MakeLatticeMover::apply(), protocols::cryst::ReportGradientsMover::compute(), protocols::cryst::DockLatticeMover::initialize(), protocols::cryst::DockLatticeMover::regenerate_lattice(), and protocols::cryst::MakeLatticeMover::setup_xtal_symminfo().

TR() [2/3]

static basic::Tracer protocols::cryst::TR ( "protocols.cryst.refinable_lattice"  )

static

TR() [3/3]

static basic::Tracer protocols::cryst::TR ( "protocols.cryst.refinable_lattice"  )

static

TSG()

static basic::Tracer protocols::cryst::TSG ( "spacegroup"  )

static

Referenced by protocols::cryst::Spacegroup::set_parameters().

TSW()

static basic::Tracer protocols::cryst::TSW ( "WallpaperGroup"  )

static

Referenced by protocols::cryst::WallpaperGroup::set_parameters().