SecondaryMatchProtocol.cc File Reference

#include <protocols/enzdes/SecondaryMatchProtocol.hh>
#include <protocols/enzdes/EnzdesBaseProtocol.hh>
#include <protocols/toolbox/match_enzdes_util/EnzdesCacheableObserver.hh>
#include <protocols/toolbox/match_enzdes_util/EnzdesCstCache.hh>
#include <protocols/toolbox/match_enzdes_util/EnzConstraintIO.hh>
#include <protocols/toolbox/match_enzdes_util/EnzCstTemplateRes.hh>
#include <protocols/toolbox/match_enzdes_util/EnzConstraintParameters.hh>
#include <protocols/toolbox/match_enzdes_util/util_functions.hh>
#include <protocols/enzdes/enzdes_util.hh>
#include <protocols/enzdes/EnzdesTaskOperations.hh>
#include <protocols/enzdes/EnzdesTaskOperations.fwd.hh>
#include <core/chemical/ResidueType.hh>
#include <core/chemical/ResidueProperties.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/chemical/util.hh>
#include <core/conformation/Residue.hh>
#include <core/kinematics/FoldTree.hh>
#include <basic/options/option.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <core/pose/datacache/CacheableDataType.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/import_pose/import_pose.hh>
#include <basic/datacache/BasicDataCache.hh>
#include <basic/datacache/CacheableString.hh>
#include <protocols/minimization_packing/PackRotamersMover.hh>
#include <protocols/toolbox/pose_manipulation/pose_manipulation.hh>
#include <basic/Tracer.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <utility>
#include <utility/string_util.hh>
#include <basic/options/keys/enzdes.OptionKeys.gen.hh>
#include <core/pose/variant_util.hh>
#include <utility/vector1.hh>
#include <core/scoring/EnergyGraph.hh>
#include <core/pack/task/ResidueLevelTask.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::enzdes

Functions
static basic::Tracer	protocols::enzdes::tr ("protocols.enzdes.SecondaryMatchProtocol")

Detailed Description

Author

Florian Richter