protocols::simple_ddg Namespace Reference

Classes
class	AlaScan
class	AlaScanFilterCreator
class	ddG
class	ddGCreator
class	DdgFilter
class	DdgFilterCreator
class	DdGScan
class	DdGScanCreator
class	InterfaceBindingEnergyDensityFilter
class	InterfaceBindingEnergyDensityFilterCreator
class	SSElementBisectddGFilter
class	SSElementBisectddGFilterCreator

Typedefs
typedef utility::pointer::shared_ptr< ddG >	ddGOP
typedef utility::pointer::shared_ptr< ddG const >	ddGCOP
typedef utility::pointer::shared_ptr< DdgFilter >	DdgFilterOP
typedef utility::pointer::shared_ptr< DdgFilter const >	DdgFilterCOP
typedef utility::pointer::shared_ptr< DdGScan >	DdGScanOP
typedef utility::pointer::shared_ptr< DdGScan const >	DdGScanCOP
typedef utility::pointer::shared_ptr< InterfaceBindingEnergyDensityFilter >	InterfaceBindingEnergyDensityFilterOP
typedef utility::pointer::shared_ptr< InterfaceBindingEnergyDensityFilter const >	InterfaceBindingEnergyDensityFilterCOP
typedef utility::pointer::shared_ptr< SSElementBisectddGFilter >	SSElementBisectddGFilterOP
typedef utility::pointer::shared_ptr< SSElementBisectddGFilter const >	SSElementBisectddGFilterCOP

Functions
static basic::Tracer	TR ("protocols.simple_filters.AlaScan")
static basic::Tracer	TR ("protocols.simple_ddg.ddG")
static basic::Tracer	TR ("protocols.simple_filters.DdgFilter")
static basic::Tracer	TR ("protocols.simple_ddg.InterfaceBindingEnergyDensityFilter")

Typedef Documentation

ddGCOP

typedef utility::pointer::shared_ptr< ddG const > protocols::simple_ddg::ddGCOP

DdgFilterCOP

typedef utility::pointer::shared_ptr< DdgFilter const > protocols::simple_ddg::DdgFilterCOP

DdgFilterOP

typedef utility::pointer::shared_ptr< DdgFilter > protocols::simple_ddg::DdgFilterOP

ddGOP

typedef utility::pointer::shared_ptr< ddG > protocols::simple_ddg::ddGOP

DdGScanCOP

typedef utility::pointer::shared_ptr< DdGScan const > protocols::simple_ddg::DdGScanCOP

DdGScanOP

typedef utility::pointer::shared_ptr< DdGScan > protocols::simple_ddg::DdGScanOP

InterfaceBindingEnergyDensityFilterCOP

typedef utility::pointer::shared_ptr< InterfaceBindingEnergyDensityFilter const > protocols::simple_ddg::InterfaceBindingEnergyDensityFilterCOP

InterfaceBindingEnergyDensityFilterOP

typedef utility::pointer::shared_ptr< InterfaceBindingEnergyDensityFilter > protocols::simple_ddg::InterfaceBindingEnergyDensityFilterOP

SSElementBisectddGFilterCOP

typedef utility::pointer::shared_ptr< SSElementBisectddGFilter const > protocols::simple_ddg::SSElementBisectddGFilterCOP

SSElementBisectddGFilterOP

typedef utility::pointer::shared_ptr< SSElementBisectddGFilter > protocols::simple_ddg::SSElementBisectddGFilterOP

Function Documentation

TR() [1/4]

static basic::Tracer protocols::simple_ddg::TR ( "protocols.simple_ddg.ddG"  )

static

TR() [2/4]

static basic::Tracer protocols::simple_ddg::TR ( "protocols.simple_ddg.InterfaceBindingEnergyDensityFilter"  )

static

TR() [3/4]

static basic::Tracer protocols::simple_ddg::TR ( "protocols.simple_filters.AlaScan"  )

static

Referenced by protocols::simple_ddg::DdgFilter::apply(), protocols::simple_ddg::InterfaceBindingEnergyDensityFilter::apply(), protocols::simple_ddg::ddG::apply(), protocols::simple_ddg::ddG::calculate(), protocols::simple_ddg::DdGScan::calculate(), protocols::simple_ddg::DdgFilter::compute(), protocols::simple_ddg::ddG::ddG(), protocols::simple_ddg::DdGScan::ddG_for_single_residue(), protocols::simple_ddg::AlaScan::ddG_for_single_residue(), protocols::simple_ddg::DdgFilter::DdgFilter(), protocols::simple_ddg::ddG::duplicate_waters_across_jump(), protocols::simple_ddg::ddG::fill_energy_vector(), protocols::simple_ddg::AlaScan::parse_my_tag(), protocols::simple_ddg::DdgFilter::parse_my_tag(), protocols::simple_ddg::ddG::parse_my_tag(), and protocols::simple_ddg::ddG::setup_task().

TR() [4/4]

static basic::Tracer protocols::simple_ddg::TR ( "protocols.simple_filters.DdgFilter"  )

static