SegmentPairing.fwd.hh File Reference

Handles user-specified pairing between/among segments. More...

#include <core/types.hh>
#include <utility/pointer/owning_ptr.hh>
#include <utility/vector1.fwd.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::denovo_design
	protocols::denovo_design::components

Typedefs
typedef utility::vector1< StrandOrientation >	protocols::denovo_design::components::StrandOrientations
typedef long int	protocols::denovo_design::components::RegisterShift
typedef utility::vector1< RegisterShift >	protocols::denovo_design::components::RegisterShifts
typedef std::pair< core::Size, core::Size >	protocols::denovo_design::components::ResiduePair
typedef utility::vector1< ResiduePair >	protocols::denovo_design::components::ResiduePairs
typedef utility::pointer::shared_ptr< SegmentPairing >	protocols::denovo_design::components::SegmentPairingOP
typedef utility::pointer::shared_ptr< SegmentPairing const >	protocols::denovo_design::components::SegmentPairingCOP
typedef utility::vector1< SegmentPairingOP >	protocols::denovo_design::components::SegmentPairingOPs
typedef utility::vector1< SegmentPairingCOP >	protocols::denovo_design::components::SegmentPairingCOPs
typedef utility::pointer::shared_ptr< HelixPairing >	protocols::denovo_design::components::HelixPairingOP
typedef utility::pointer::shared_ptr< HelixPairing const >	protocols::denovo_design::components::HelixPairingCOP
typedef utility::vector1< HelixPairingOP >	protocols::denovo_design::components::HelixPairingOPs
typedef utility::vector1< HelixPairingCOP >	protocols::denovo_design::components::HelixPairingCOPs
typedef utility::pointer::shared_ptr< StrandPairing >	protocols::denovo_design::components::StrandPairingOP
typedef utility::pointer::shared_ptr< StrandPairing const >	protocols::denovo_design::components::StrandPairingCOP
typedef utility::vector1< StrandPairingOP >	protocols::denovo_design::components::StrandPairingOPs
typedef utility::vector1< StrandPairingCOP >	protocols::denovo_design::components::StrandPairingCOPs
typedef utility::pointer::shared_ptr< HelixSheetPairing >	protocols::denovo_design::components::HelixSheetPairingOP
typedef utility::pointer::shared_ptr< HelixSheetPairing const >	protocols::denovo_design::components::HelixSheetPairingCOP
typedef utility::vector1< HelixSheetPairingOP >	protocols::denovo_design::components::HelixSheetPairingOPs
typedef utility::vector1< HelixSheetPairingCOP >	protocols::denovo_design::components::HelixSheetPairingCOPs

Enumerations
enum	protocols::denovo_design::components::StrandOrientation { protocols::denovo_design::components::UP = 1 , protocols::denovo_design::components::DOWN = 2 , protocols::denovo_design::components::ORIENTATIONS_END = 3 }
	Individual strands are oriented pointing either "UP" or "DOWN" If two adjacent strands have the same orientation, they are parallel If two adjacent strands have different orientation, they are antiparallel. More...

Detailed Description

Handles user-specified pairing between/among segments.

Author

Tom Linsky (tlins.nosp@m.ky@u.nosp@m.w.edu)