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Rosetta
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class declaration for StandardJobQueen More...
#include <protocols/jd3/standard/StandardJobQueen.fwd.hh>#include <protocols/jd3/JobQueen.hh>#include <protocols/jd3/Job.fwd.hh>#include <protocols/jd3/JobDigraph.fwd.hh>#include <protocols/jd3/JobOutputIndex.fwd.hh>#include <protocols/jd3/InnerLarvalJob.fwd.hh>#include <protocols/jd3/pose_inputters/PoseInputter.fwd.hh>#include <protocols/jd3/pose_inputters/PoseInputterCreator.fwd.hh>#include <protocols/jd3/pose_outputters/PoseOutputSpecification.fwd.hh>#include <protocols/jd3/pose_outputters/PoseOutputter.fwd.hh>#include <protocols/jd3/pose_outputters/PoseOutputterCreator.fwd.hh>#include <protocols/jd3/pose_outputters/SecondaryPoseOutputter.fwd.hh>#include <protocols/jd3/standard/PreliminaryLarvalJob.hh>#include <protocols/jd3/standard/PreliminaryLarvalJobTracker.fwd.hh>#include <protocols/jd3/standard/StandardInnerLarvalJob.fwd.hh>#include <core/pose/Pose.fwd.hh>#include <utility/options/OptionCollection.fwd.hh>#include <utility/options/keys/OptionKeyList.fwd.hh>#include <utility/tag/Tag.fwd.hh>#include <utility/tag/XMLSchemaGeneration.fwd.hh>#include <utility/vector1.hh>#include <numeric/DiscreteIntervalEncodingTree.hh>#include <string>#include <map>Classes | |
| class | protocols::jd3::standard::StandardJobQueen |
| The StandardJobQueen is meant to handle the most common form of Rosetta jobs where a protocol is applied to a single input structure to generate a single output structure. Most JobQueens in Rosetta will to derive from this JobQueen. To make the process of deriving new JobQueens easy, this class's API has been carefully designed to be easy to work with and the class itself has been designed to do as much heavy lifting as possible and to leave only the responsibilities that the StandardJobQueen could not perform to the derived classes. More... | |
Namespaces | |
| protocols | |
| The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP. | |
| protocols::jd3 | |
| protocols::jd3::standard | |
Typedefs | |
| typedef std::list< PreliminaryLarvalJob > | protocols::jd3::standard::PreliminaryLarvalJobs |
| typedef std::map< std::string, pose_outputters::PoseOutputterOP > | protocols::jd3::standard::RepresentativeOutputterMap |
| typedef std::map< std::string, pose_outputters::SecondaryPoseOutputterOP > | protocols::jd3::standard::SecondaryRepresentativeOutputterMap |
| typedef std::map< std::pair< std::string, std::string >, pose_outputters::PoseOutputterOP > | protocols::jd3::standard::PoseOutputterMap |
| typedef std::map< std::pair< std::string, std::string >, pose_outputters::SecondaryPoseOutputterOP > | protocols::jd3::standard::SecondaryOutputterMap |
| typedef numeric::DiscreteIntervalEncodingTree< core::Size > | protocols::jd3::standard::SizeDIET |
class declaration for StandardJobQueen
1.9.1