Conformation.hh File Reference

conformation container More...

#include <core/conformation/Conformation.fwd.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/signals/ConnectionEvent.fwd.hh>
#include <core/conformation/signals/GeneralEvent.fwd.hh>
#include <core/conformation/signals/IdentityEvent.fwd.hh>
#include <core/conformation/signals/LengthEvent.fwd.hh>
#include <core/conformation/signals/XYZEvent.fwd.hh>
#include <core/chemical/AA.hh>
#include <core/chemical/ResidueType.fwd.hh>
#include <core/chemical/ResidueTypeSet.fwd.hh>
#include <core/chemical/CacheableResidueTypeSets.hh>
#include <core/chemical/PoseResidueTypeSet.fwd.hh>
#include <core/types.hh>
#include <core/id/AtomID_Mask.fwd.hh>
#include <core/id/DOF_ID.hh>
#include <core/id/NamedAtomID.hh>
#include <core/id/PartialAtomID.fwd.hh>
#include <core/id/TorsionID.fwd.hh>
#include <core/environment/DofPassport.fwd.hh>
#include <core/kinematics/Jump.fwd.hh>
#include <core/kinematics/RT.fwd.hh>
#include <core/kinematics/Stub.fwd.hh>
#include <core/kinematics/AtomTree.fwd.hh>
#include <core/kinematics/DomainMap.fwd.hh>
#include <core/kinematics/FoldTree.fwd.hh>
#include <core/conformation/membrane/MembraneInfo.fwd.hh>
#include <core/conformation/carbohydrates/GlycanTreeSet.fwd.hh>
#include <core/conformation/carbohydrates/GlycanTreeSetObserver.fwd.hh>
#include <core/conformation/parametric/ParametersSet.fwd.hh>
#include <core/conformation/parametric/Parameters.fwd.hh>
#include <utility/VirtualBase.hh>
#include <utility/signals/PausableSignalHub.hh>
#include <basic/datacache/BasicDataCache.fwd.hh>
#include <numeric/xyzMatrix.fwd.hh>
#include <boost/iterator/indirect_iterator.hpp>
#include <core/id/AtomID_Map.hh>

Classes
class	core::conformation::Conformation
	A container of Residues and the kinematics to manage them. More...

Namespaces
	core
	A class for reading in the atom type properties.
	core::conformation

Functions
std::ostream &	core::conformation::operator<< (std::ostream &os, Conformation const &conf)

Detailed Description

conformation container

Author

Phil Bradley

Rebecca Alford (rfalf.nosp@m.ord1.nosp@m.2@gma.nosp@m.il.c.nosp@m.om), Julia Koehler Leman (julia.nosp@m..koe.nosp@m.hler1.nosp@m.982@.nosp@m.gmail.nosp@m..com), Jeff Gray (jgray.nosp@m.@jhu.nosp@m..edu) – added membrane modelling framework

Vikram K. Mulligan (vmull.nosp@m.ig@u.nosp@m.w.edu) – added support for parametric conformation generation, 17 Nov 2014.