Directory dependency graph for conformation:
Directories | |
| directory | carbohydrates |
| directory | membrane |
| directory | orbitals |
| directory | parametric |
| directory | signals |
| directory | symmetry |
Files | |
| file | AbstractRotamerTrie.cc |
| Auto-generated serialization template functions. | |
| file | AbstractRotamerTrie.fwd.hh |
| Forward declaration of the AbstractRotamerTrie class, defined in the conformation layer. | |
| file | AbstractRotamerTrie.hh |
| Base class from which all Tries will derive; this class is a handle for the tries that will be defined in core/scoring, but which have to be stored by the RotamerSetBase class defined in core/conformation. | |
| file | Atom.cc |
| Method definitions for conformation::Atom. | |
| file | Atom.fwd.hh |
| Class declaration for conformation::Atom. | |
| file | Atom.hh |
| Class definitions for conformation::Atom. | |
| file | AtomGraph.cc |
| file | AtomGraph.fwd.hh |
| file | AtomGraph.hh |
| file | AtomGraphData.fwd.hh |
| file | AtomGraphData.hh |
| file | Conformation.cc |
| Method definitions for the Conformation class. | |
| file | Conformation.fwd.hh |
| forward declaration for Conformation.hh | |
| file | Conformation.hh |
| conformation container | |
| file | find_neighbors.fwd.hh |
| file | find_neighbors.hh |
| file | PointGraph.cc |
| Graph for detecting neighbors; vertices store points, edges store square distances. | |
| file | PointGraph.fwd.hh |
| Graph for detecting neighbors; vertices store points, edges store square distances. | |
| file | PointGraph.hh |
| Graph for detecting neighbors; vertices store points, edges store square distances. | |
| file | PointGraphData.cc |
| Serlialization routines for the two types templated upon to define the PointGraph. | |
| file | PointGraphData.fwd.hh |
| file | PointGraphData.hh |
| classes to work with UpperEdgeGraph for fast neighbor detection | |
| file | ppo_torsion_bin.cc |
| file | ppo_torsion_bin.fwd.hh |
| An enumeration to represent a binning of the phi/psi/omega torsions. | |
| file | ppo_torsion_bin.hh |
| Functions for assigning and manipulating the phi/psi/omega torsion bins. | |
| file | PseudoBond.cc |
| file | PseudoBond.fwd.hh |
| file | PseudoBond.hh |
| file | Residue.cc |
| Method definitions for the Residue class. | |
| file | Residue.functions.cc |
| Implementation of non-member functions that operate on Residue objects. | |
| file | Residue.functions.hh |
| Header file for non-member functions that operate on Residue objects. | |
| file | Residue.fwd.hh |
| file | Residue.hh |
| Method declarations and simple accessor definitions for the Residue class. | |
| file | residue_datacache.hh |
| enum for storing data in the Residue's datacache | |
| file | ResidueFactory.cc |
| file | ResidueFactory.hh |
| file | ResidueKinWriter.cc |
| Class to write kinemage-formatted output for Residue and Conformation. | |
| file | ResidueKinWriter.fwd.hh |
| file | ResidueKinWriter.hh |
| Class to write kinemage-formatted output for Residue and Conformation. | |
| file | ResidueMatcher.cc |
| file | ResidueMatcher.fwd.hh |
| file | ResidueMatcher.hh |
| file | RotamerSetBase.cc |
| RotamerSetBase class implementation. | |
| file | RotamerSetBase.fwd.hh |
| file | RotamerSetBase.hh |
| Abstract base class for a class that holds disembodied Residues (ie not contained within a Pose) as Rotamers. | |
| file | RotamerSetCacheableDataType.hh |
| enum for the DataCache within the RotamerSet class; EnergyMethods in core/scoring forward-declare themselves here if they intend to cache data within the the RotamerSet. | |
| file | UltraLightResidue.cc |
| file | UltraLightResidue.fwd.hh |
| file | UltraLightResidue.hh |
| an extremely light residue class used for fast direct cartesian space transforms on ligands. | |
| file | util.cc |
| file | util.hh |
