match_disulfide_to_scaffold.cc File Reference

#include <basic/options/option.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/option_macros.hh>
#include <basic/Tracer.hh>
#include <core/conformation/Residue.hh>
#include <devel/init.hh>
#include <core/import_pose/import_pose.hh>
#include <core/scoring/hbonds/HBondSet.hh>
#include <core/scoring/hbonds/hbonds.hh>
#include <core/conformation/util.hh>
#include <core/io/pdb/pdb_writer.hh>
#include <core/pose/Pose.hh>
#include <core/scoring/rms_util.hh>
#include <core/scoring/ScoreFunction.hh>
#include <numeric/xyz.functions.hh>
#include <numeric/xyz.io.hh>
#include <ObjexxFCL/FArray2D.hh>
#include <ObjexxFCL/format.hh>
#include <ObjexxFCL/string.functions.hh>
#include <core/scoring/dssp/Dssp.hh>
#include <sstream>
#include <utility/io/izstream.hh>
#include <utility/io/ozstream.hh>
#include <stdio.h>
#include <core/pose/PDBInfo.hh>
#include <numeric/xyzVector.hh>
#include <core/scoring/sasa.hh>
#include <core/id/AtomID.hh>
#include <core/id/AtomID_Map.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/disulfides/FullatomDisulfideEnergyContainer.hh>
#include <core/scoring/Energies.hh>

Functions
void	register_options ()
int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR ("apps.pilot_apps.shilei.match_disulfide_to_scaffold")

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, pyrosetta::create_score_function, test.T009_Exceptions::e, create_a3b_hbs::i, basic::options::OptionKeys::in::in, basic::init(), basic::options::option, beta_nonlocal::pose, test.T008_Serialization::pose1, pyrosetta.distributed.io::pose_from_file, register_options(), basic::options::OptionKeys::frags::scoring::scoring, basic::options::TR, and utility_exit_with_message.

register_options()

void register_options

(

)

References NEW_OPT.

Referenced by main().

Variable Documentation

TR

basic::Tracer TR("apps.pilot_apps.shilei.match_disulfide_to_scaffold") ( "apps.pilot_apps.shilei.match_disulfide_to_scaffold"  )

static