SwitchChainOrder

Back to Mover page.

SwitchChainOrder

Reorder the chains in the pose, for instance switching between chain B and A. Can also be used to cut out a chain from the PDB (simply state which chains should remain after cutting out the undesired chain).

<SwitchChainOrder name="(&string)" chain_order="(&string)"/>

chain_order: a string of chain numbers. This is the order of chains in the new pose. For instance, "21" will form a pose ordered B then A, "12" will change nothing. Can also be used to reduce the number of chains. For example "1" will only take the first chain. PDBInfoLabels are preserved.

Autogenerated Tag Syntax Documentation:

XRW TO DO

<SwitchChainOrder name="(&string;)" chain_order="(&string;)"
        chain_num="(&nnegative_int_cslist;)" chain_name="(&chain_cslist;)"
        invert_chains="(false &bool;)" residue_numbers_setter="(&string;)"
        scorefxn="(&string;)" />

chain_order: Order of final chains
chain_num: List of final chain positions, to be correlated to chain_name
chain_name: List of final chain names, to be correlated to chain_num
invert_chains: If true, apply on the inverse of chain selection (as specified in name or number options)
residue_numbers_setter: List of final chain names, to be correlated to chain_num
scorefxn: Name of score function to use

chain_order: a string of chain numbers. This is the order of chains in the new pose. For instance, "21" will form a pose ordered B then A, "12" will change nothing.

SwitchChainOrder

SwitchChainOrder

See Also