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Rosetta Core
2015.09
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- k -
- k()
: core::scoring::electron_density::OneGaussianScattering
, core::scoring::fiber_diffraction::OneGaussianScattering
- K()
: core::scoring::methods::BBDepCartBondedParameters
, core::scoring::methods::BBIndepCartBondedParameters
, core::scoring::methods::CartBondedParameters
- Kappa()
: core::scoring::FACTSPotential
- KarplusFunc()
: core::scoring::func::KarplusFunc
- keep_1st_child_pos()
: core::kinematics::tree::Atom
, core::kinematics::tree::BondedAtom
, core::kinematics::tree::JumpAtom
- keep_aas()
: core::pack::task::operation::RestrictAbsentCanonicalAAS
- keep_chain_and_cutpoint_open_matched()
: core::pose::full_model_info::FullModelParameters
- keep_dof_fixed()
: core::kinematics::tree::Atom
, core::kinematics::tree::Atom_
, core::kinematics::tree::BondedAtom
, core::kinematics::tree::JumpAtom
- keep_input_protonation_state()
: core::io::pdb::FileDataOptions
- keep_stub_in_residue()
: core::kinematics::Edge
- keyname()
: core::import_pose::PDBSilentStructCreator
, core::io::silent::BinarySilentStructCreator
, core::io::silent::ProteinSilentStruct_SinglePrecCreator
, core::io::silent::ProteinSilentStructCreator
, core::io::silent::RigidBodySilentStructCreator
, core::io::silent::RNA_SilentStructCreator
, core::io::silent::ScoreFileSilentStructCreator
, core::io::silent::ScoreJumpFileSilentStructCreator
, core::io::silent::SilentStructCreator
, core::pack::dunbrack::DunbrackConstraintCreator
, core::pack::task::operation::AddBehaviorRLTCreator
, core::pack::task::operation::AllResFilterCreator
, core::pack::task::operation::AnyResFilterCreator
, core::pack::task::operation::AppendResidueRotamerSetCreator
, core::pack::task::operation::AppendRotamerCreator
, core::pack::task::operation::AppendRotamerSetCreator
, core::pack::task::operation::ChainIsCreator
, core::pack::task::operation::ChainIsntCreator
, core::pack::task::operation::DisallowIfNonnativeCreator
, core::pack::task::operation::DisallowIfNonnativeRLTCreator
, core::pack::task::operation::ExtraChiCutoffCreator
, core::pack::task::operation::ExtraRotamersCreator
, core::pack::task::operation::ExtraRotamersGenericCreator
, core::pack::task::operation::IncludeCurrentCreator
, core::pack::task::operation::InitializeExtraRotsFromCommandlineCreator
, core::pack::task::operation::InitializeFromCommandlineCreator
, core::pack::task::operation::NoRepackDisulfidesCreator
, core::pack::task::operation::NoResFilterCreator
, core::pack::task::operation::OperateOnCertainResiduesCreator
, core::pack::task::operation::OperateOnResidueSubsetCreator
, core::pack::task::operation::OptCysHGCreator
, core::pack::task::operation::OptHCreator
, core::pack::task::operation::PreserveCBetaCreator
, core::pack::task::operation::PreventRepackingCreator
, core::pack::task::operation::PreventRepackingRLTCreator
, core::pack::task::operation::ReadResfileAndObeyLengthEventsCreator
, core::pack::task::operation::ReadResfileCreator
, core::pack::task::operation::ReplicateTaskCreator
, core::pack::task::operation::ResFilterCreator
, core::pack::task::operation::ResidueHasPropertyCreator
, core::pack::task::operation::ResidueIndexIsCreator
, core::pack::task::operation::ResidueIndexIsntCreator
, core::pack::task::operation::ResidueLacksPropertyCreator
, core::pack::task::operation::ResidueName3IsCreator
, core::pack::task::operation::ResidueName3IsntCreator
, core::pack::task::operation::ResiduePDBIndexIsCreator
, core::pack::task::operation::ResiduePDBIndexIsntCreator
, core::pack::task::operation::ResiduePDBInfoHasLabelCreator
, core::pack::task::operation::ResiduePDBInfoLacksLabelCreator
, core::pack::task::operation::ResidueTypeFilterCreator
, core::pack::task::operation::ResLvlTaskOperationCreator
, core::pack::task::operation::RestrictAbsentCanonicalAASCreator
, core::pack::task::operation::RestrictAbsentCanonicalAASRLTCreator
, core::pack::task::operation::RestrictResidueToRepackingCreator
, core::pack::task::operation::RestrictToRepackingCreator
, core::pack::task::operation::RestrictToRepackingRLTCreator
, core::pack::task::operation::RestrictYSDesignCreator
, core::pack::task::operation::RotamerExplosionCreator
, core::pack::task::operation::SetRotamerCouplingsCreator
, core::pack::task::operation::SetRotamerLinksCreator
, core::pack::task::operation::TaskOperationCreator
, core::pack::task::residue_selector::AndResidueSelectorCreator
, core::pack::task::residue_selector::ChainSelectorCreator
, core::pack::task::residue_selector::ClashBasedRepackShellSelectorCreator
, core::pack::task::residue_selector::InterGroupInterfaceByVectorSelectorCreator
, core::pack::task::residue_selector::JumpDownstreamSelectorCreator
, core::pack::task::residue_selector::JumpUpstreamSelectorCreator
, core::pack::task::residue_selector::NeighborhoodResidueSelectorCreator
, core::pack::task::residue_selector::NotResidueSelectorCreator
, core::pack::task::residue_selector::NumNeighborsSelectorCreator
, core::pack::task::residue_selector::OrResidueSelectorCreator
, core::pack::task::residue_selector::ResidueIndexSelectorCreator
, core::pack::task::residue_selector::ResidueSelectorCreator
, core::pack::task::residue_selector::TrueResidueSelectorCreator
, core::scoring::constraints::AmbiguousConstraintCreator
, core::scoring::constraints::AmbiguousNMRConstraintCreator
, core::scoring::constraints::AmbiguousNMRDistanceConstraintCreator
, core::scoring::constraints::AngleConstraintCreator
, core::scoring::constraints::AtomPairConstraintCreator
, core::scoring::constraints::BigBinConstraintCreator
, core::scoring::constraints::ConstraintCreator
, core::scoring::constraints::CoordinateConstraintCreator
, core::scoring::constraints::DihedralConstraintCreator
, core::scoring::constraints::DihedralPairConstraintCreator
, core::scoring::constraints::FabConstraintCreator
, core::scoring::constraints::KofNConstraintCreator
, core::scoring::constraints::LocalCoordinateConstraintCreator
, core::scoring::constraints::MultiConstraintCreator
, core::scoring::constraints::SequenceProfileConstraintCreator
, core::scoring::constraints::SiteConstraintCreator
, core::scoring::constraints::SiteConstraintResiduesCreator
, core::sequence::ChemicalShiftSequenceCreator
, core::sequence::CompositeSequenceCreator
, core::sequence::SequenceCouplingCreator
, core::sequence::SequenceCreator
, core::sequence::SequenceProfileCreator
, core::sequence::SimpleSequenceCreator
- keys()
: core::scoring::motif::MotifHash
- keyword_in_progress()
: core::io::pdb::HeaderInformation
- keywords()
: core::io::pdb::HeaderInformation
- kill_antiparallel()
: core::scoring::SS_Killhairpins_Info
- kill_parallel()
: core::scoring::SS_Killhairpins_Info
- KofNConstraint()
: core::scoring::constraints::KofNConstraint
- KofNConstraintCreator()
: core::scoring::constraints::KofNConstraintCreator
- KromerMann()
: core::scoring::electron_density::KromerMann
, core::scoring::fiber_diffraction::KromerMann
- kT()
: core::sequence::MCAligner
- Ktheta()
: core::scoring::mm::MMBondAngleResidueTypeParam