SheetBuilder.cc File Reference

secondary structure will hold statistics about secondary structure predictions sources can be from More...

#include <protocols/jumping/SheetBuilder.hh>
#include <core/fragment/SecondaryStructure.hh>
#include <protocols/jumping/SameStrand.hh>
#include <core/scoring/dssp/PairingsList.hh>
#include <core/types.hh>
#include <core/kinematics/FoldTree.hh>
#include <basic/Tracer.hh>
#include <ObjexxFCL/FArray1D.hh>
#include <ObjexxFCL/FArray1A.hh>
#include <ObjexxFCL/FArray2A.hh>
#include <ObjexxFCL/FArray3D.hh>
#include <ObjexxFCL/StaticIndexRange.hh>
#include <ObjexxFCL/format.hh>
#include <numeric/random/random.hh>
#include <numeric/numeric.functions.hh>
#include <cstdlib>
#include <utility/vector1.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::jumping

Functions
static thread_local basic::Tracer	tr ("protocols.jumping")

Detailed Description

secondary structure will hold statistics about secondary structure predictions sources can be from

• fragments
• psipred files ? other stuff

Detailed:

from converting jumping_pairings.cc of rosetta++ into mini

Author

Oliver Lange

Christopher Miles (cmile.nosp@m.s@uw.nosp@m..edu)

Function Documentation

static thread_local basic::Tracer tr ( "protocols.jumping"  )

static