EnvClaimBroker.cc File Reference

#include <protocols/environment/EnvClaimBroker.hh>
#include <core/chemical/VariantType.hh>
#include <core/environment/FoldTreeSketch.hh>
#include <core/conformation/util.hh>
#include <protocols/environment/claims/EnvClaim.hh>
#include <protocols/environment/claims/VirtResClaim.hh>
#include <protocols/environment/claims/JumpClaim.hh>
#include <protocols/environment/ProtectedConformation.hh>
#include <protocols/environment/ClientMover.hh>
#include <protocols/environment/Environment.hh>
#include <protocols/environment/AutoCutData.hh>
#include <core/id/TorsionID.hh>
#include <core/id/AtomID.hh>
#include <core/id/types.hh>
#include <utility/excn/Exceptions.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/kinematics/util.hh>
#include <core/kinematics/Exceptions.hh>
#include <core/kinematics/AtomTree.hh>
#include <core/kinematics/tree/BondedAtom.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/ResidueFactory.hh>
#include <core/conformation/Atom.hh>
#include <core/pose/Pose.hh>
#include <basic/datacache/BasicDataCache.hh>
#include <basic/datacache/WriteableCacheableMap.hh>
#include <basic/datacache/WriteableCacheableData.hh>
#include <core/pose/datacache/CacheableDataType.hh>
#include <core/pose/PDBInfo.hh>
#include <utility/string_util.hh>
#include <boost/foreach.hpp>
#include <boost/functional/hash.hpp>
#include <basic/Tracer.hh>
#include <functional>
#include <algorithm>
#include <numeric>
#include <set>

Classes
class	protocols::environment::Comparator
	A brief comparator object initialized with the correct strength accessor for reuse of setup_passports. More...

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::environment

Functions
static thread_local basic::Tracer	tr ("protocols.environment.EnvClaimBroker", basic::t_info)
void	protocols::environment::update_pdb_info (core::pose::PDBInfoCOP input_pdb_info, core::pose::Pose &pose, EnvClaimBroker::BrokerResult const &result)
void	protocols::environment::safe_set_conf (core::pose::Pose &pose, core::conformation::ConformationOP conf)
core::Size	protocols::environment::find_implied_cut (utility::vector1< core::Size > const &cycle, core::conformation::Conformation const &conf)
utility::vector1< core::Size >	protocols::environment::introduce_datamap_cuts (FoldTreeSketch const &fts, basic::datacache::BasicDataCache &datacache)
core::Size	protocols::environment::inherit_cuts (utility::vector1< core::Size > const &cycle, core::kinematics::FoldTree const &input_ft)
ControlStrength const &	protocols::environment::init_str_selector (std::pair< claims::DOFElement, ClientMoverOP > const &d)
ControlStrength const &	protocols::environment::ctrl_str_selector (std::pair< claims::DOFElement, ClientMoverOP > const &d)

Detailed Description

Author

Justin R. Porter

Function Documentation

static thread_local basic::Tracer tr ( "protocols.environment.EnvClaimBroker"  , basic::t_info    )

static