protocols::init Namespace Reference

Functions
void	init (int argc, char *argv[])
	Command line init() version. More...
void	init (utility::vector1< std::string > const &args)
	Wrapper for the command line version. More...

Function Documentation

void protocols::init::init	(	int	argc,
		char *	argv[]
	)

Command line init() version.

References core::init::init().

Referenced by protocols::antibody::AntibodyInfo::AntibodyInfo(), protocols::canonical_sampling::CanonicalSamplingMover::apply(), protocols::hybridization::BackboneTorsionPerturbation::BackboneTorsionPerturbation(), protocols::md::CartesianMD::CartesianMD(), protocols::toolbox::KCluster::cluster(), protocols::LoopRebuild::desired_loops(), protocols::docking::DockingProtocol::DockingProtocol(), protocols::LoopRebuild::get_ccd_closure_exist(), protocols::LoopRebuild::get_chain_break_tolerance(), protocols::LoopRebuild::get_combine_if_fail_exist(), protocols::LoopRebuild::get_desired_loops_exist(), protocols::LoopRebuild::get_loop_combine_rate(), protocols::LoopRebuild::get_looprlx_cycle_ratio(), protocols::LoopRebuild::get_rmsd_tolerance(), protocols::LoopRebuild::get_score_filter_cutoff(), protocols::mpi_refinement::MPI_Refine_Master::go(), protocols::mpi_refinement::MPI_Refine_Emperor::go(), protocols::loophash::MPI_LoopHashRefine_Master::go(), protocols::loophash::MPI_LoopHashRefine_Emperor::go(), protocols::stepwise::monte_carlo::initialize_attachment_type_name(), protocols::stepwise::monte_carlo::initialize_move_type_name(), protocols::hybridization::InsertChunkMover::InsertChunkMover(), protocols::stepwise::modeler::rna::helix::is_blank_seq(), protocols::LoopRebuild::loop_model(), protocols::farna::FullAtomRNA_Fragments::read_vall_torsions(), protocols::simple_moves::symmetry::SymShakeStructureMover::run_mc(), protocols::simple_moves::ShakeStructureMover::run_mc(), protocols::mpi_refinement::Serial_Refine::Serial_Refine(), protocols::simple_moves::ShakeStructureMover::set_temp_based_on_ens_diversity(), protocols::simple_filters::ScoreCutoffFilter::set_unweighted(), protocols::LoopRebuild::shorten_long_terminal_loop(), protocols::sparta::Sparta::SpartaLib::SpartaLib(), protocols::moves::to_string(), and protocols::stepwise::modeler::rna::phosphate::to_string().

void protocols::init::init

(

utility::vector1< std::string > const &

args

)

Wrapper for the command line version.

References core::init::init().