HighResDocker.cc File Reference

implementation of resfile reader and its command classes More...

#include <protocols/ligand_docking/HighResDocker.hh>
#include <protocols/ligand_docking/HighResDockerCreator.hh>
#include <protocols/ligand_docking/InterfaceBuilder.hh>
#include <protocols/ligand_docking/ligand_options/Interface.hh>
#include <protocols/ligand_docking/MinimizeLigand.hh>
#include <protocols/ligand_docking/MoveMapBuilder.hh>
#include <protocols/ligand_docking/TetherLigand.hh>
#include <core/pose/util.hh>
#include <protocols/ligand_docking/UnconstrainedTorsionsMover.hh>
#include <protocols/moves/Mover.hh>
#include <protocols/simple_moves/MinMover.hh>
#include <protocols/moves/MonteCarlo.hh>
#include <protocols/simple_moves/PackRotamersMover.hh>
#include <protocols/simple_moves/RotamerTrialsMover.hh>
#include <protocols/rigid/RigidBodyMover.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/optimization/MinimizerOptions.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/pack/task/ResfileReader.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pack/rotamer_set/UnboundRotamersOperation.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/pose/Pose.hh>
#include <core/conformation/Residue.hh>
#include <core/chemical/ResidueType.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/packing.OptionKeys.gen.hh>
#include <core/types.hh>
#include <basic/Tracer.hh>
#include <core/pack/task/PackerTask.hh>
#include <utility/tag/Tag.hh>
#include <basic/datacache/DataMap.hh>
#include <boost/foreach.hpp>
#include <string>
#include <set>
#include <protocols/ligand_docking/LigandArea.hh>
#include <utility/vector0.hh>
#include <utility/excn/Exceptions.hh>
#include <utility/vector1.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::ligand_docking

Functions
static thread_local basic::Tracer	protocols::ligand_docking::high_res_docker_tracer ("protocols.ligand_docking.ligand_options.Protocol", basic::t_debug)

Detailed Description

implementation of resfile reader and its command classes

Author

Gordon Lemmon (glemm.nosp@m.on@g.nosp@m.mail..nosp@m.com), adapted from the ResfileReader code by Steven Lewis (smlew.nosp@m.i@un.nosp@m.c.edu) and Andrew Leaver-Fay