protocols::jd2::parser Namespace Reference

Classes
class	BluePrint
class	DataLoader
	A class for loading arbitrary data into the XML parser's basic::datacache::DataMap. More...
class	DataLoaderCreator
	A class for creating new instances of DataLoaders for use in the XML Parser. More...
class	DataLoaderFactory
	A factory for creating DataLoaders, which are able to load arbitrary data into the basic::datacache::DataMap used in the XML-based parser. This factory supports the load-time registration scheme allowing DataLoaders to be defined in libraries outside of protocols.lib. More...
class	DataLoaderRegistrator
	This templated class will register an instance of an DataLoaderCreator (class T) with the DataLoaderFactory. It will ensure that no DataLoaderCreator is registered twice, and, centralizes this registration logic so that thread safety issues can be handled in one place. More...
class	FragmentReader
class	FragSetLoader
	A class for loading arbitrary data into the XML parser's basic::datacache::DataMap. More...
class	FragSetLoaderCreator
class	MonteCarloLoader
	The MonteCarloLoader will create named MonteCarlo objects and load them into the basic::datacache::DataMap. More...
class	MonteCarloLoaderCreator
class	ResidueSelectorLoader
	A class for loading arbitrary data into the XML parser's basic::datacache::DataMap. More...
class	ResidueSelectorLoaderCreator
class	ScoreFunctionLoader
	A class for loading arbitrary data into the XML parser's basic::datacache::DataMap. More...
class	ScoreFunctionLoaderCreator
class	TaskOperationLoader
	A class for loading arbitrary data into the XML parser's basic::datacache::DataMap. More...
class	TaskOperationLoaderCreator

Typedefs
typedef utility::pointer::shared_ptr < BluePrint >	BluePrintOP
typedef utility::pointer::shared_ptr < BluePrint const >	BluePrintCOP
typedef utility::pointer::shared_ptr < DataLoader >	DataLoaderOP
typedef utility::pointer::shared_ptr < DataLoader const >	DataLoaderCOP
typedef utility::pointer::shared_ptr < DataLoaderCreator >	DataLoaderCreatorOP
typedef utility::pointer::shared_ptr < DataLoaderCreator const >	DataLoaderCreatorCOP
typedef utility::pointer::shared_ptr < FragmentReader >	FragmentReaderOP

Functions
static thread_local basic::Tracer	TR ("protocols.jd2.parser.MonteCarloLoader")
static thread_local basic::Tracer	TR ("protocols.jd2.parser.ResidueSelectorLoader")
static thread_local basic::Tracer	TR ("protocols.jd2.parser.ScoreFunctionLoader")
static thread_local basic::Tracer	TR ("protocols.jd2.parser.TaskOperationLoader")

Typedef Documentation

typedef utility::pointer::shared_ptr< BluePrint const > protocols::jd2::parser::BluePrintCOP

typedef utility::pointer::shared_ptr< BluePrint > protocols::jd2::parser::BluePrintOP

typedef utility::pointer::shared_ptr< DataLoader const > protocols::jd2::parser::DataLoaderCOP

typedef utility::pointer::shared_ptr< DataLoaderCreator const > protocols::jd2::parser::DataLoaderCreatorCOP

typedef utility::pointer::shared_ptr< DataLoaderCreator > protocols::jd2::parser::DataLoaderCreatorOP

typedef utility::pointer::shared_ptr< DataLoader > protocols::jd2::parser::DataLoaderOP

typedef utility::pointer::shared_ptr< FragmentReader > protocols::jd2::parser::FragmentReaderOP

Function Documentation

static thread_local basic::Tracer protocols::jd2::parser::TR ( "protocols.jd2.parser.MonteCarloLoader"  )

static

Referenced by protocols::jd2::parser::FragmentReader::apply(), protocols::jd2::parser::BluePrint::BluePrint(), protocols::jd2::parser::TaskOperationLoader::load_data(), protocols::jd2::parser::ScoreFunctionLoader::load_data(), protocols::jd2::parser::MonteCarloLoader::load_data(), protocols::jd2::parser::ResidueSelectorLoader::load_data(), protocols::jd2::parser::FragSetLoader::load_data(), protocols::jd2::parser::FragmentReader::parse_tag(), protocols::jd2::parser::BluePrint::read_blueprint(), and protocols::jd2::parser::BluePrint::set_movemap().

static thread_local basic::Tracer protocols::jd2::parser::TR ( "protocols.jd2.parser.TaskOperationLoader"  )

static

static thread_local basic::Tracer protocols::jd2::parser::TR ( "protocols.jd2.parser.ResidueSelectorLoader"  )

static

static thread_local basic::Tracer protocols::jd2::parser::TR ( "protocols.jd2.parser.ScoreFunctionLoader"  )

static