AddMembraneMover.cc File Reference

Add Membrane Representation to the Pose. More...

#include <protocols/membrane/AddMembraneMover.hh>
#include <protocols/membrane/AddMembraneMoverCreator.hh>
#include <protocols/moves/Mover.hh>
#include <protocols/membrane/geometry/util.hh>
#include <core/pose/PDBInfo.hh>
#include <core/conformation/Conformation.hh>
#include <core/conformation/membrane/MembraneParams.hh>
#include <core/conformation/membrane/MembraneInfo.hh>
#include <core/conformation/membrane/SpanningTopology.hh>
#include <core/conformation/membrane/Span.hh>
#include <core/conformation/membrane/LipidAccInfo.hh>
#include <protocols/membrane/SetMembranePositionMover.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/ResidueFactory.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/pose/Pose.hh>
#include <core/types.hh>
#include <protocols/rosetta_scripts/util.hh>
#include <protocols/filters/Filter.hh>
#include <core/conformation/membrane/types.hh>
#include <utility/vector1.hh>
#include <numeric/xyzVector.hh>
#include <utility/file/FileName.hh>
#include <utility/file/file_sys_util.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/mp.OptionKeys.gen.hh>
#include <utility/tag/Tag.hh>
#include <basic/datacache/DataMap.hh>
#include <basic/Tracer.hh>
#include <cstdlib>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::membrane

Macros
#define	INCLUDED_protocols_membrane_AddMembraneMover_cc

Functions
static thread_local basic::Tracer	TR ("protocols.membrane.AddMembraneMover")

Detailed Description

Add Membrane Representation to the Pose.

Given a pose, setup membrane topology, lips info, and a membrane virtual residue in the pose. All of this information is coordinated via the MembraneInfo object maintained in the Pose's conformation. After applying AddMembraneMover to the pose, pose.conformation().is_membrane() should always return true.

Author

Rebecca Alford (rfalf.nosp@m.ord1.nosp@m.2@gma.nosp@m.il.c.nosp@m.om)

Note

Last Modified (2/9/14)

Macro Definition Documentation

#define INCLUDED_protocols_membrane_AddMembraneMover_cc

Function Documentation

static thread_local basic::Tracer TR ( "protocols.membrane.AddMembraneMover"  )

static