AntibodyDatabaseManager.cc File Reference

Handles all loading of CDR, Framework, and cluster/dmap info from external database file. More...

#include <protocols/antibody/database/AntibodyDatabaseManager.hh>
#include <protocols/antibody/design/AntibodyGraftDesignMover.hh>
#include <protocols/antibody/AntibodyInfo.hh>
#include <protocols/antibody/AntibodyEnum.hh>
#include <protocols/antibody/database/CDRSetOptions.hh>
#include <protocols/antibody/clusters/CDRClusterEnum.hh>
#include <protocols/antibody/clusters/CDRClusterEnumManager.hh>
#include <protocols/antibody/design/util.hh>
#include <protocols/antibody/design/CDRSeqDesignOptions.hh>
#include <core/pose/Pose.hh>
#include <core/pose/datacache/CacheableDataType.hh>
#include <basic/datacache/BasicDataCache.hh>
#include <core/conformation/Conformation.hh>
#include <core/chemical/AA.hh>
#include <utility/sql_database/DatabaseSessionManager.hh>
#include <protocols/features/ProteinSilentReport.hh>
#include <protocols/features/util.hh>
#include <basic/database/sql_utils.hh>
#include <boost/uuid/uuid.hpp>
#include <cppdb/frontend.h>
#include <basic/database/open.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/OptionKeys.hh>
#include <basic/options/keys/antibody.OptionKeys.gen.hh>
#include <basic/Tracer.hh>
#include <string>
#include <utility/file/file_sys_util.hh>
#include <utility/file/FileName.hh>
#include <utility/string_util.hh>
#include <utility/py/PyAssert.hh>
#include <boost/algorithm/string.hpp>
#include <fstream>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::antibody

Typedefs
typedef std::map< CDRNameEnum, vector1< CDRPose > >	protocols::antibody::CDRSet

Functions
static thread_local basic::Tracer	TR ("antibody.design.AntibodyDatabaseManager")

Detailed Description

Handles all loading of CDR, Framework, and cluster/dmap info from external database file.

Author

Jared Adolf-Bryfogle (jadol.nosp@m.fbr@.nosp@m.gmail.nosp@m..com)

Function Documentation

static thread_local basic::Tracer TR ( "antibody.design.AntibodyDatabaseManager"  )

static