SecondarySimilarity.hh File Reference

scores a fragment by secondary structure similarity More...

#include <core/types.hh>
#include <protocols/frag_picker/FragmentPicker.hh>
#include <protocols/frag_picker/scores/FragmentScoreMap.hh>
#include <protocols/frag_picker/scores/CachingScoringMethod.hh>
#include <core/fragment/SecondaryStructure.hh>
#include <utility/vector1.hh>

Classes
class	protocols::frag_picker::scores::SecondarySimilarity
	scores a fragment by secondary structure similarity More...
class	protocols::frag_picker::scores::MakeSecondarySimilarity
	Maker class that produces a new SecondarySimilarity object. More...

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::frag_picker
	protocols::frag_picker::scores

Typedefs
typedef utility::pointer::shared_ptr < SecondarySimilarity >	protocols::frag_picker::scores::SecondarySimilarityOP
typedef utility::pointer::shared_ptr < SecondarySimilarity const >	protocols::frag_picker::scores::SecondarySimilarityCOP

Detailed Description

scores a fragment by secondary structure similarity

Author

Dominik Gront (dgron.nosp@m.t@ch.nosp@m.em.uw.nosp@m..edu.nosp@m..pl)