DsspDesignOperation.cc File Reference

Design residues with selected amino acids depending on DSSP secondary structure assignment. All functionality here is included in the LayerDesign task operation, but this filter has significantly reduced overhead by avoiding slow SASA calculations. More...

#include <protocols/toolbox/task_operations/DsspDesignOperation.hh>
#include <protocols/toolbox/task_operations/DsspDesignOperationCreator.hh>
#include <core/conformation/Conformation.hh>
#include <core/pack/task/PackerTask_.hh>
#include <core/pose/Pose.hh>
#include <core/pose/symmetry/util.hh>
#include <core/pose/selection.hh>
#include <core/scoring/dssp/Dssp.hh>
#include <core/types.hh>
#include <protocols/jd2/parser/BluePrint.hh>
#include <protocols/rosetta_scripts/util.hh>
#include <basic/Tracer.hh>
#include <basic/options/keys/OptionKeys.hh>
#include <boost/assign/list_inserter.hpp>
#include <boost/foreach.hpp>
#include <utility/exit.hh>
#include <utility/tag/Tag.hh>
#include <utility/vector1.hh>
#include <set>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::toolbox
	protocols::toolbox::task_operations

Functions
static thread_local basic::Tracer	TR ("protocols.toolbox.TaskOperations.DsspDesignOperation")

Detailed Description

Design residues with selected amino acids depending on DSSP secondary structure assignment. All functionality here is included in the LayerDesign task operation, but this filter has significantly reduced overhead by avoiding slow SASA calculations.

Author

Brian Koepnick (koepn.nosp@m.ick@.nosp@m.uw.ed.nosp@m.u)

Function Documentation

static thread_local basic::Tracer TR ( "protocols.toolbox.TaskOperations.DsspDesignOperation"  )

static