methods Directory Reference

Directory dependency graph for methods:

Directories
directory	pcs
directory	pcs2
directory	pcsTs1
directory	pcsTs2
directory	pcsTs3
directory	pcsTs4
directory	saxs

Files
file	EnsembleEnergy.cc
	Function to subtract out individual reference energies during ensemble docking.
file	EnsembleEnergy.hh
	Function to constrain particular residues to an interface during docking.
file	EnsembleEnergyCreator.hh
	Declaration for the class that connects EnsembleEnergy with the ScoringManager.
file	InterchainEnvEnergy.cc
	Statistically derived rotamer pair potentials.
file	InterchainEnvEnergy.hh
	Statistically derived rotamer pair potentials.
file	InterchainEnvEnergyCreator.hh
	Declaration for the class that connects InterchainEnvEnergy with the ScoringManager.
file	InterchainPairEnergy.cc
	Statistically derived rotamer pair potentials.
file	InterchainPairEnergy.hh
	Statistically derived rotamer pair potentials.
file	InterchainPairEnergyCreator.hh
	Declaration for the class that connects InterchainPairEnergy with the ScoringManager.
file	ResidualDipolarCouplingEnergyRigidSegments.cc
	RDC energy - comparing experimental RDC values to calculated values.
file	ResidualDipolarCouplingEnergyRigidSegments.fwd.hh
file	ResidualDipolarCouplingEnergyRigidSegments.hh
	RDC energy - comparing experimental RDC values to calculated values.
file	ResidualDipolarCouplingEnergyRigidSegmentsCreator.hh
	Declaration for the class that connects ResidualDipolarCouplingEnergy with the ScoringManager.
file	SpecialRotamerEnergy.cc
	Adds a bonus to any rotamer that is flagged.
file	SpecialRotamerEnergy.fwd.hh
	Adds a bonus to any rotamer that is flagged.
file	SpecialRotamerEnergy.hh
	Adds a bonus to any rotamer that is flagged.
file	SpecialRotamerEnergyCreator.hh
	Declaration for the class that connects SpecialRotamerEnergy with the ScoringManager.